RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 BUD23O43709 281 aaKnown RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 SNX2O60749 519 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 MT-ND3P03897 115 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 FAM86B2P0C5J1 330 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 MAPTP10636 758 aaKnown RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ETS2P15036 469 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 SCNN1BP51168 640 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 CHN2P52757 468 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 EIF6P56537 245 aaKnown RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 SIK1P57059 783 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 HIF1AQ16665 826 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 CCSAPQ6IQ19 270 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 LLGL2Q6P1M3 1020 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 MCOLN2Q8IZK6 566 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.43□□□□□ -0.92e-11■■■■■ 59.4
SNHG1-209ENST00000538654 ALLCQ8N6M5 410 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 RBM15BQ8NDT2 890 aaKnown RBP9.43□□□□□ -0.9
SNHG1-209ENST00000538654 JADE3Q92613 823 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 BTBD9Q96Q07 612 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ACSS3Q9H6R3 686 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 S100A14Q9HCY8 104 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ARHGEF4Q9NR80 690 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ETNK2Q9NVF9 386 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 SORCS3Q9UPU3 1222 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF510Q9Y2H8 683 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
SNHG1-209ENST00000538654 TMEM238LA0A1B0GVL6 79 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 ENO1P06733 434 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 CYP3A4P08684 503 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 HARSP12081 509 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 BMP3P12645 472 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 HPCAP84074 193 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SULT2A1Q06520 285 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 GABPAQ06546 454 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 CYLC2Q14093 348 aaPredicted RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 FASTKD3Q14CZ7 662 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 TMEM95Q3KNT9 176 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 RNASEH2BQ5TBB1 312 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 LIN9Q5TKA1 542 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 KCTD1Q719H9 257 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 ENOSF1Q7L5Y1 443 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 ZNF677Q86XU0 584 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 RCOR2Q8IZ40 523 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 LRRC43Q8N309 656 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SLC43A3Q8NBI5 491 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 PYROXD1Q8WU10 500 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 DDX1Q92499 740 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 KAT5Q92993 513 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 RBM17Q96I25 401 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 APOPT1Q96IL0 206 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 NT5C1BQ96P26 610 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 ACCSQ96QU6 501 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 PAFAH2Q99487 392 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 THTPAQ9BU02 230 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 NMUR2Q9GZQ4 415 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 TMEM117Q9H0C3 514 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 MRPL47Q9HD33 250 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SAGE1Q9NXZ1 904 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SLC7A8Q9UHI5 535 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 BLOC1S6Q9UL45 172 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 ZHX2Q9Y6X8 837 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SLITRK3O94933 977 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 VCLP18206 1134 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 CCNFP41002 786 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 TSPAN7P41732 249 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 RPL5P46777 297 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 DEUP1Q05D60 604 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 GRIK5Q16478 980 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 MMEL1Q495T6 779 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 PPP1R2P3Q6NXS1 205 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 C15orf52Q6ZUT6 534 aaKnown RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 RFX8Q6ZV50 586 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 MYO1HQ8N1T3 1032 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SAMD3Q8N6K7 520 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 MZB1Q8WU39 189 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 DCAF4Q8WV16 495 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 PRR11Q96HE9 360 aaPredicted RBP9.42□□□□□ -0.9
SNHG1-209ENST00000538654 CYTH2Q99418 400 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 AMNQ9BXJ7 453 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 PCDH9Q9HC56 1237 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 THEGQ9P2T0 379 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 SLC17A7Q9P2U7 560 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 IKBKGQ9Y6K9 419 aa9.42□□□□□ -0.9
SNHG1-209ENST00000538654 K7ENM7 598 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PEX1O43933 1283 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 GRIN3BO60391 1043 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ABCB7O75027 752 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 IL33O95760 270 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 PGRP06401 933 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 UNGP13051 313 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-209ENST00000538654 GPC3P51654 580 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 INHBCP55103 352 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ANKRD20A4Q4UJ75 823 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 EFHC1Q5JVL4 640 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 ATG16L1Q676U5 607 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 CIAPIN1Q6FI81 312 aa9.41□□□□□ -0.9
SNHG1-209ENST00000538654 RAPH1Q70E73 1250 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms