RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 PTPRN2Q92932 1015 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 PIWIL1Q96J94 861 aaKnown RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 KRT7P08729 469 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 RBP3P10745 1247 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 GRM1Q13255 1194 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 MPZL3Q6UWV2 235 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 LBX2Q6XYB7 198 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 ATP11CQ8NB49 1132 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 SLC4A11Q8NBS3 891 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 SPATA18Q8TC71 538 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 MZB1Q8WU39 189 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 ANKRD36BP1Q96IX9 119 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 ELOVL4Q9GZR5 314 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 PTPRHQ9HD43 1115 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 NKX1-2Q9UD57 310 aaPredicted RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 POLR2AP24928 1970 aaKnown RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 ANK1P16157 1881 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 ITGB3P05106 788 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.4
CPNE8-203ENST00000538596 HADHQ16836 314 aaKnown RBP12.52□□□□□ -0.4
CPNE8-203ENST00000538596 CDO1Q16878 200 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 TAF1BQ53T94 588 aaPredicted RBP12.52□□□□□ -0.4
CPNE8-203ENST00000538596 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 RGS9BPQ6ZS82 235 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 ZNF276Q8N554 614 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 RFWD2Q8NHY2 731 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 DCAKDQ8WVC6 231 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 GPR20Q99678 358 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 SENP1Q9P0U3 644 aa12.52□□□□□ -0.4
CPNE8-203ENST00000538596 GPR25O00155 361 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 MICAL2O94851 1124 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 PROZP22891 400 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 EDNRBP24530 442 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 ELK3P41970 407 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 SLC18A1P54219 525 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 DPYSL3Q14195 570 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 C15orf59Q2T9L4 293 aaPredicted RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 TRNP1Q6NT89 227 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 TSHZ1Q6ZSZ6 1077 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 MTDHQ86UE4 582 aaKnown RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 CCDC125Q86Z20 511 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 SLC7A6OSQ96CW6 309 aaPredicted RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 CDT1Q9H211 546 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 TXLNGQ9NUQ3 528 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 USP18Q9UMW8 372 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 M0QYV0 167 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 GM2AP17900 193 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 CCND1P24385 295 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 EPHB2P29323 1055 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 SKIV2L2P42285 1042 aaKnown RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 CLNS1AP54105 237 aaKnown RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 IGBP1P78318 339 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 VGLL4Q14135 290 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 MXD4Q14582 209 aaPredicted RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 PCGF5Q86SE9 256 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 AGGF1Q8N302 714 aaeCLIP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
CPNE8-203ENST00000538596 ZNF570Q96NI8 536 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 DHRS4Q9BTZ2 278 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 LHX5Q9H2C1 402 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 CYLDQ9NQC7 956 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.41
CPNE8-203ENST00000538596 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 ACKR2O00590 384 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 B4GALT4O60513 344 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 FAM155BO75949 473 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 TRUB2O95900 331 aaKnown RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 PHBP35232 272 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 ATP11AP98196 1134 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 PTPN11Q06124 597 aaPredicted RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 SEPT7Q16181 437 aaKnown RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 TAZQ16635 292 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 FAXCQ5TGI0 409 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 JADE1Q6IE81 842 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 NLRP9Q7RTR0 991 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 LRRC6Q86X45 466 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 PDIK1LQ8N165 341 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 BANPQ8N9N5 519 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 SERAC1Q96JX3 654 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 SPATC1LQ9H0A9 340 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 LRMDAQ9H2I8 198 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 NOP53Q9NZM5 478 aaKnown RBP12.51□□□□□ -0.41
CPNE8-203ENST00000538596 MCM3APO60318 1980 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 CENPFP49454 3210 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 C2orf71A6NGG8 1288 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 KBTBD13C9JR72 458 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 E7ESA3 106 aa12.51□□□□□ -0.41
CPNE8-203ENST00000538596 FZD9O00144 591 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms