RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ACTR5Q9H9F9 607 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 HMX1Q9NP08 348 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 INTS9Q9NV88 658 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 KLHL11Q9NVR0 708 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 MORF4L1Q9UBU8 362 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 TJP2Q9UDY2 1190 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 TPX2Q9ULW0 747 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 SHOC2Q9UQ13 582 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 SMIM23A6NLE4 172 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 TSPAN1O60635 241 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 CDH16O75309 829 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 ERBB2P04626 1255 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 ITGB3P05106 788 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 KRT3P12035 628 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 CD19P15391 556 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 ARF4P18085 180 aaPredicted RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 PSMA2P25787 234 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 IL1R2P27930 398 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 GCAP28676 217 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 GRM5P41594 1212 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 GPD2P43304 727 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 MAGEA4P43358 317 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 LIG3P49916 1009 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 ARSEP51690 589 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 CDH8P55286 799 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 OSTNP61366 133 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 CACNB2Q08289 660 aaPredicted RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 SKIDA1Q1XH10 827 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 TTC31Q49AM3 519 aaPredicted RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 GKAP1Q5VSY0 366 aaPredicted RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 LHX8Q68G74 356 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 MTHFD1LQ6UB35 978 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 TAX1BP1Q86VP1 789 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 PACS2Q86VP3 889 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 CDR2LQ86X02 465 aaPredicted RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 LRRC34Q8IZ02 419 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 KIAA0319LQ8IZA0 1049 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 TTC13Q8NBP0 860 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 MAML1Q92585 1016 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 PRCCQ92733 491 aaPredicted RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 KAT2BQ92831 832 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 CPXM1Q96SM3 734 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 OSBPL7Q9BZF2 842 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 UBE2OQ9C0C9 1292 aaKnown RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 PPCSQ9HAB8 311 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 METTL5Q9NRN9 209 aaKnown RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 FLRT1Q9NZU1 646 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 NXF1Q9UBU9 619 aaKnown RBP9.71□□□□□ -0.86
DDB1-211ENST00000538280 HMGXB4Q9UGU5 601 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 ITGA11Q9UKX5 1188 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 DERAQ9Y315 318 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 EVPLQ92817 2033 aa9.71□□□□□ -0.86
DDB1-211ENST00000538280 LRRD1A4D1F6 860 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 SMAPO00193 183 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 DPYSL4O14531 572 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 ALOX15BO15296 676 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 ZSCAN5DPP0CG00 497 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 P4HA1P13674 534 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CREB1P16220 341 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 PECAM1P16284 738 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 ATF7P17544 494 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 CYP3A5P20815 502 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 KDELR1P24390 212 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 PCK1P35558 622 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 GCLCP48506 637 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 VPS41P49754 854 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 SLC18A1P54219 525 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 CCNA1P78396 465 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 IFT88Q13099 833 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 HADHQ16836 314 aaKnown RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 ANKRD20A8PQ5CZ79 823 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 KAZNQ674X7 775 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 GPR153Q6NV75 609 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CYP4V2Q6ZWL3 525 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 CPLX4Q7Z7G2 160 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 PCGF5Q86SE9 256 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 PRUNE1Q86TP1 453 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 ZNF410Q86VK4 478 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CYP4X1Q8N118 509 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 MICALL1Q8N3F8 863 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 TMEM130Q8N3G9 435 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CCDC197Q8NCU1 140 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 GPRC5AQ8NFJ5 357 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 AFG1LQ8WV93 481 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CKAP2Q8WWK9 683 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CCT6BQ92526 530 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 USP6NLQ92738 828 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 ZNF668Q96K58 619 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 CFAP57Q96MR6 1250 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDB1-211ENST00000538280 PRMT1Q99873 361 aaKnown RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
DDB1-211ENST00000538280 CTNNAL1Q9UBT7 734 aa9.7□□□□□ -0.86
DDB1-211ENST00000538280 FETUBQ9UGM5 382 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms