RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 HHLA1C9JL84 531 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 F8VP50 259 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 XPO1O14980 1071 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 PJA2O43164 708 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 ZSCAN12O43309 604 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 TMEM253P0C7T8 217 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 ADCY1Q08828 1119 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 DUSP4Q13115 394 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 RAB30Q15771 203 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 DDR2Q16832 855 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 C10orf76Q5T2E6 689 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 C4orf50Q6ZRC1 276 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 SCN4BQ8IWT1 228 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 GPR152Q8TDT2 470 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 CLEC4CQ8WTT0 213 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 NDRG1Q92597 394 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 C11orf84Q9BUA3 381 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 CSNK1G1Q9HCP0 422 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 OSGEPQ9NPF4 335 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 CNOT8Q9UFF9 292 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 GUCA1BQ9UMX6 200 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 PCDHB5Q9Y5E4 795 aa16.52■□□□□ 0.24
SFSWAP-206ENST00000537582 RFXAPO00287 272 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 BUB1O43683 1085 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SEC24AO95486 1093 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SPATA31D3P0C874 917 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 LCP1P13796 627 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 PTPRDP23468 1912 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 PLA2G4AP47712 749 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 NDUFV1P49821 464 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 C1QBPQ07021 282 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 KIF5AQ12840 1032 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 GPM6BQ13491 265 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 NFE2Q16621 373 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 CFAP221Q4G0U5 840 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SPATA31D4Q6ZUB0 917 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 XYLT1Q86Y38 959 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 GDPD5Q8WTR4 605 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 CTNNBL1Q8WYA6 563 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 TRIM7Q9C029 511 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 MIS12Q9H081 205 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SYNCQ9H7C4 482 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 RXFP1Q9HBX9 757 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 KCND1Q9NSA2 647 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 NCANO14594 1321 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 C2orf71A6NGG8 1288 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 GOLGA8SH3BPF8 625 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 CYP1A2P05177 515 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 RB1P06400 928 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 GRIK1P39086 918 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 GPC5P78333 572 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 MLLT1Q03111 559 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 FAM183BPQ6ZVS7 135 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SCUBE3Q8IX30 993 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 C18orf8Q96DM3 657 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 KLHL5Q96PQ7 755 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SEPT5Q99719 369 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 SLC28A3Q9HAS3 691 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 DMAP1Q9NPF5 467 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 INTUQ9ULD6 942 aa16.51■□□□□ 0.23
SFSWAP-206ENST00000537582 ATP8B3O60423 1300 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 H3BNC9 293 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 FSCN2O14926 492 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 PAPSS1O43252 624 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 ABLIM3O94929 683 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 MOCS3O95396 460 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 MSNP26038 577 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 GABRB2P47870 512 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 RPL34P49207 117 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 ADIGQ0VDE8 80 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 RAB33AQ14088 237 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 TAF5Q15542 800 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 MGAT5BQ3V5L5 792 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 ARHGAP29Q52LW3 1261 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 TMEM110Q86TL2 294 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 MRPL43Q8N983 215 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 SLC35G2Q8TBE7 412 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 MICAL1Q8TDZ2 1067 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 STK32AQ8WU08 396 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 TIFAQ96CG3 184 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 FUBP3Q96I24 572 aaKnown RBP eCLIP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 BTBD6Q96KE9 485 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 SAMD11Q96NU1 681 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 OXCT2Q9BYC2 517 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 LUC7LQ9NQ29 371 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 FNIP2Q9P278 1114 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
SFSWAP-206ENST00000537582 CALB1P05937 261 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 HAPLN1P10915 354 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 SLC8A3P57103 927 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 UBE3AQ05086 875 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 SMC1AQ14683 1233 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 OR6B2Q6IFH4 312 aa16.49■□□□□ 0.23
SFSWAP-206ENST00000537582 ZNF662Q6ZS27 426 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms