RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 AFMP43652 599 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 GALK1P51570 392 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 CYP24A1Q07973 514 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 KNOP1Q1ED39 458 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 ZNF699Q32M78 642 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 USP39Q53GS9 565 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 ZNF667Q5HYK9 610 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 FSTL4Q6MZW2 842 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 SYT13Q7L8C5 426 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 OSTM1Q86WC4 334 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 RPLP0P6Q8NHW5 317 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 PCED1BQ96HM7 432 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 C8orf48Q96LL4 319 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 BACH2Q9BYV9 841 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 TBC1D14Q9P2M4 693 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 FRMD4BQ9Y2L6 1034 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 SH3BP1Q9Y3L3 701 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 PCDHGA5Q9Y5G8 931 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 WNT6Q9Y6F9 365 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 SCN1AP35498 2009 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 F5P12259 2224 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 A0A087X0B3 334 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 MED19A0JLT2 244 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 SLC30A4O14863 429 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 PTPN1P18031 435 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 LMO2P25791 158 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 YWHAQP27348 245 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 DGKEP52429 567 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 NOP14P78316 857 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 USP4Q13107 963 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 ZNF77Q15935 545 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 CNNM4Q6P4Q7 775 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 TMEM150AQ86TG1 271 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 TTC30AQ86WT1 665 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 KIAA1958Q8N8K9 716 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 ZSWIM2Q8NEG5 633 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 HPS3Q969F9 1004 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 CYP2S1Q96SQ9 504 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 BLZF1Q9H2G9 400 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 ARRDC1-AS1Q9H2J1 176 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 SLC39A2Q9NP94 309 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 USP25Q9UHP3 1055 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 ATP6V1DQ9Y5K8 247 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 ANK1P16157 1881 aa14.1□□□□□ -0.15
CLSTN3-205ENST00000535452 DCDC2BA2VCK2 349 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 F8VP50 259 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 LEFTY2O00292 366 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 CALUO43852 315 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 ATP2C2O75185 946 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 F13A1P00488 732 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 APODP05090 189 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 MYL1P05976 194 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 PXNP49023 591 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 WNT7BP56706 349 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 DMWDQ09019 674 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 SRSF5Q13243 272 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 BYSLQ13895 437 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 DMC1Q14565 340 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 E2F4Q16254 413 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 NUP93Q8N1F7 819 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 B3GALNT2Q8NCR0 500 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 KBTBD7Q8WVZ9 684 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 OVCA2Q8WZ82 227 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 FBXO32Q969P5 355 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 SNX21Q969T3 373 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 SPACA7Q96KW9 195 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 HHIPQ96QV1 700 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 PKMYT1Q99640 499 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 FGFBP2Q9BYJ0 223 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 POLMQ9NP87 494 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 BCCIPQ9P287 314 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 CFAP54Q96N23 3096 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 MYO15AQ9UKN7 3530 aa14.09□□□□□ -0.15
CLSTN3-205ENST00000535452 SPTBN4Q9H254 2564 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 COL4A2P08572 1712 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 C2orf78A6NCI8 922 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 STAU1O95793 577 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 KRT13P13646 458 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 TCF3P15923 654 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 TAF10Q12962 218 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 NCOA4Q13772 614 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 SGSM1Q2NKQ1 1148 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 EML3Q32P44 896 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 PPM1JQ5JR12 505 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 SHC4Q6S5L8 630 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 TRMT11Q7Z4G4 463 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 C12orf56Q8IXR9 622 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 SCFD1Q8WVM8 642 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 OTUB2Q96DC9 234 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 MRPL45Q9BRJ2 306 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 FBXO44Q9H4M3 255 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 PARD6AQ9NPB6 346 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 DMAP1Q9NPF5 467 aaPredicted RBP14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 CRTAC1Q9NQ79 661 aa14.08□□□□□ -0.16
CLSTN3-205ENST00000535452 VPS45Q9NRW7 570 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms