RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SMARCD2Q92925 531 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 BPIFA3Q9BQP9 254 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 HSD3B7Q9H2F3 369 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 SLITRK6Q9H5Y7 841 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 TASP1Q9H6P5 420 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 UBE2TQ9NPD8 197 aaPredicted RBP24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 PCDHB4Q9Y5E5 795 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 PTPRDP23468 1912 aa24.09■■□□□ 1.45
SFSWAP-204ENST00000535399 SYCE3A1L190 88 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 TNFRSF10BO14763 440 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 ZNF18P17022 549 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 MAP3K7CLP57077 242 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 ARHGAP15Q53QZ3 475 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 TANGO2Q6ICL3 276 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 GJB7Q6PEY0 223 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 TMEM270Q6UE05 265 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 AOPEPQ8N6M6 819 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 KXD1Q9BQD3 176 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 NAT10Q9H0A0 1025 aaKnown RBP24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 TRPV4Q9HBA0 871 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 SIX2Q9NPC8 291 aa24.08■■□□□ 1.45
SFSWAP-204ENST00000535399 RNF225M0QZC1 329 aaPredicted RBP24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 ECI2O75521 394 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 DPY19L2P1Q6NXN4 242 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 CLEC20AQ6ZU45 233 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 UBALD2Q8IYN6 164 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 NUP93Q8N1F7 819 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 JAKMIP2Q96AA8 810 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 SLC46A2Q9BY10 475 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 PLA2G2FQ9BZM2 168 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 IL37Q9NZH6 218 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 EHD2Q9NZN4 543 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 APEX2Q9UBZ4 518 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 DUSP12Q9UNI6 340 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 CNTN6Q9UQ52 1028 aa24.07■■□□□ 1.44
SFSWAP-204ENST00000535399 MYO10Q9HD67 2058 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 NARSO43776 548 aaKnown RBP24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 PAEPP09466 180 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 NPR3P17342 541 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 DDX6P26196 483 aaKnown RBP eCLIP24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 ZNF132P52740 706 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 SLC5A3P53794 718 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 ENOSF1Q7L5Y1 443 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 DHX40Q8IX18 779 aaKnown RBP24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 SCAMP5Q8TAC9 235 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 MRPS31Q92665 395 aaKnown RBP24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 ELSPBP1Q96BH3 223 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 DUSP16Q9BY84 665 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 ZFP14Q9HCL3 533 aa24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 LIMA1Q9UHB6 759 aaKnown RBP24.06■■□□□ 1.44
SFSWAP-204ENST00000535399 HHLA1C9JL84 531 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 PES1O00541 588 aaKnown RBP24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 RTN3O95197 1032 aaPredicted RBP24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 VDRP11473 427 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 WEE1P30291 646 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 VIPR2P41587 438 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 KCNMA1Q12791 1236 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 TXNDC8Q6A555 127 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 MON1AQ86VX9 555 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 ARID3BQ8IVW6 561 aaPredicted RBP24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 RBBP8NLQ8NC74 664 aaPredicted RBP24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 FAM81BQ96LP2 452 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 VPS16Q9H269 839 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 ZMYM5Q9UJ78 669 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 KIAA1257Q9ULG3 409 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 NCANO14594 1321 aa24.05■■□□□ 1.44
SFSWAP-204ENST00000535399 SOBPA7XYQ1 873 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 CD19P15391 556 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 YWHAQP27348 245 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 ZNF165P49910 485 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 MFAP3P55082 362 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 TAF10Q12962 218 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 ZSCAN23Q3MJ62 389 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 SGO2Q562F6 1265 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 TTC30AQ86WT1 665 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 MAB21L3Q8N8X9 362 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 ANKRD52Q8NB46 1076 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 TFAP2BQ92481 460 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 RSPRY1Q96DX4 576 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 ZSWIM1Q9BR11 485 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 PNPLA8Q9NP80 782 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 C11orf16Q9NQ32 467 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 COMMD8Q9NX08 183 aa24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 AJAP1Q9UKB5 411 aaPredicted RBP24.04■■□□□ 1.44
SFSWAP-204ENST00000535399 TRIOO75962 3097 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 FAM92AA1XBS5 289 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 ZNF840PA6NDX5 716 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 LRRC10BA6NIK2 292 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 O00370 1275 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 SRFP11831 508 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 COPB1P53618 953 aaKnown RBP24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 SIGLEC14Q08ET2 396 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 GOLGA7BQ2TAP0 167 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 TRIM67Q6ZTA4 783 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 APTXQ7Z2E3 356 aaKnown RBP24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 GPRIN1Q7Z2K8 1008 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 GPIHBP1Q8IV16 184 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 TRPM5Q9NZQ8 1165 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 TSPAN16Q9UKR8 245 aa24.03■■□□□ 1.44
SFSWAP-204ENST00000535399 HEPACAM2A8MVW5 462 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms