RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 KIAA1257Q9ULG3 409 aa18.84■□□□□ 0.61
SFSWAP-203ENST00000535236 B2RBV5 119 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 NAMPTP43490 491 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 CLCN3P51790 818 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 ORC1Q13415 861 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 CCNI2Q6ZMN8 369 aaPredicted RBP18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 GALNT4Q8N4A0 578 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 DSEQ9UL01 958 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 CAB39Q9Y376 341 aaPredicted RBP18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 PSTPIP1O43586 416 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 AVPR1AP37288 418 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 CTCFP49711 727 aaPredicted RBP18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 TRIM69Q86WT6 500 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 CELF4Q9BZC1 486 aaKnown RBP18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 USE1Q9NZ43 259 aa18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 CHORDC1Q9UHD1 332 aaPredicted RBP18.83■□□□□ 0.61
SFSWAP-203ENST00000535236 UNC45BQ8IWX7 931 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 USP38Q8NB14 1042 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 RUSC1Q9BVN2 902 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 MTMR12Q9C0I1 747 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 GTF3C4Q9UKN8 822 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 GPC1P35052 558 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 ERO1BQ86YB8 467 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 ARMC2Q8NEN0 867 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 DDI1Q8WTU0 396 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 FBXO28Q9NVF7 368 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 APPL1Q9UKG1 709 aa18.83■□□□□ 0.6
SFSWAP-203ENST00000535236 TRIM49D1C9J1S8 452 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 EPHB3P54753 998 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 ITPK1Q13572 414 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 VPS50Q96JG6 964 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 KRCC1Q9NPI7 259 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 SUPT20HL2P0C7V6 817 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 GARTP22102 1010 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 PBLDP30039 288 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 SLC15A2Q16348 729 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 FAXCQ5TGI0 409 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 BARGINQ6ZT62 677 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 USP49Q70CQ1 688 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 ELOA2Q8IYF1 753 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 CCT8L2Q96SF2 557 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 THUMPD3Q9BV44 507 aaKnown RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 FRMD8P1Q9BZ68 369 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 RPLP2P05387 115 aaKnown RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 ALDH6A1Q02252 535 aaKnown RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 DENND1BQ6P3S1 775 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 MYO1HQ8N1T3 1032 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 CHI3L1P36222 383 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 TRIP10Q15642 601 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 IYDQ6PHW0 289 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 PHACTR4Q8IZ21 702 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 UBXN6Q9BZV1 441 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 ADARB2Q9NS39 739 aaKnown RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 RPS6KL1Q9Y6S9 549 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 ZBTB39O15060 712 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 RASSF9O75901 435 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 SUPT7LO94864 414 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 WLSQ5T9L3 541 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 FBXO16Q8IX29 292 aaPredicted RBP18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 SENP2Q9HC62 589 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 VPS28Q9UK41 221 aa18.82■□□□□ 0.6
SFSWAP-203ENST00000535236 SYNCRIPO60506 623 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 SERPINI2O75830 405 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 VTNP04004 478 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 CCDC159P0C7I6 412 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 MAPK1P28482 360 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 PLOD1Q02809 727 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 TBL3Q12788 808 aaKnown RBP18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 PWP1Q13610 501 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 SLFN11Q7Z7L1 901 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 HERC6Q8IVU3 1022 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 CNDP1Q96KN2 507 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 DYRK1BQ9Y463 629 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 LOC100653049A0A140TA62 436 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 KRT34O76011 436 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 ITGALP20701 1170 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 EFEMP1Q12805 493 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 ZNF438Q7Z4V0 828 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 MAP3K13O43283 966 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 GRK3P35626 688 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 PDK2Q15119 407 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 DAGLBQ8NCG7 672 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 THAP2Q9H0W7 228 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 NCF1BA6NI72 391 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 NCF1CA8MVU1 366 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 RHOCP08134 193 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 NCF1P14598 390 aaPredicted RBP18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 KBTBD12Q3ZCT8 623 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 TUBGCP3Q96CW5 907 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 ISCUQ9H1K1 167 aa18.81■□□□□ 0.6
SFSWAP-203ENST00000535236 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 THP07101 528 aa18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 KLRC1P26715 233 aa18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 CLK1P49759 484 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 BCAT1P54687 386 aa18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 RHOAP61586 193 aa18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 CPB2Q96IY4 423 aa18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 UBE2OQ9C0C9 1292 aaKnown RBP18.8■□□□□ 0.6
SFSWAP-203ENST00000535236 ILKAPQ9H0C8 392 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms