RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 CHSY1Q86X52 802 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 PIDD1Q9HB75 910 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 DDX56Q9NY93 547 aaKnown RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 GABBR1Q9UBS5 961 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 MTO1Q9Y2Z2 717 aaKnown RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 GNAT1P11488 350 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 LIG4P49917 911 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 NEK3P51956 506 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.3■□□□□ 0.2
TPBG-202ENST00000535040 ZC3H15Q8WU90 426 aaKnown RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 RRAGCQ9HB90 399 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 SIP14410 1827 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 PDCD2LQ9BRP1 358 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 MMADHCQ9H3L0 296 aaPredicted RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 SYNCQ9H7C4 482 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 ARHGEF4Q9NR80 690 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 METTL5Q9NRN9 209 aaKnown RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 STX18Q9P2W9 335 aaKnown RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 AGO2Q9UKV8 859 aaKnown RBP16.3■□□□□ 0.2
TPBG-202ENST00000535040 AFG3L2Q9Y4W6 797 aa16.3■□□□□ 0.2
TPBG-202ENST00000535040 C2orf71A6NGG8 1288 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 TMEM63AO94886 807 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 CALB1P05937 261 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 RPL22P35268 128 aaKnown RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 SARNPP82979 210 aaKnown RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 OTUD4Q01804 1114 aaKnown RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 MTM1Q13496 603 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 RCN2Q14257 317 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 SH2D5Q6ZV89 423 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 UBR7Q8N806 425 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 PHC3Q8NDX5 983 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 RDM1Q8NG50 284 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 ACTL9Q8TC94 416 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 SERAC1Q96JX3 654 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 LBHD1Q9BQE6 289 aaPredicted RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 LPXNO60711 386 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 RARBP10826 455 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 PAPOLAP51003 745 aaKnown RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 ZBTB41Q5SVQ8 909 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 NOL9Q5SY16 702 aaKnown RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 TELO2Q9Y4R8 837 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 TESPA1A2RU30 521 aaPredicted RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 AP1B1Q10567 949 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 PIGHQ14442 188 aaPredicted RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 RNF220Q5VTB9 566 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 DCUN1D2Q6PH85 259 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 NIPA2Q8N8Q9 360 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
TPBG-202ENST00000535040 PXMP2Q9NR77 195 aa16.29■□□□□ 0.2
TPBG-202ENST00000535040 IRF6O14896 467 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 DGAT1O75907 488 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 SKIP12755 728 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 DYNLT1P63172 113 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 ZBTB16Q05516 673 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 PALM2Q8IXS6 379 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 VPS52Q8N1B4 723 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 OR5B17Q8NGF7 314 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 ZBTB45Q96K62 511 aaPredicted RBP16.28■□□□□ 0.2
TPBG-202ENST00000535040 RMDN3Q96TC7 470 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 VCXQ9H320 206 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 RBAKQ9NYW8 714 aaPredicted RBP16.28■□□□□ 0.2
TPBG-202ENST00000535040 CNTN3Q9P232 1028 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 C2CD2Q9Y426 696 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 PEX10O60683 326 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 IL1BP01584 269 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 MT-ND3P03897 115 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 BGNP21810 368 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 SLC18A2Q05940 514 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 FAM91A1Q658Y4 838 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
TPBG-202ENST00000535040 IGDCC3Q8IVU1 814 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 TAB3Q8N5C8 712 aaPredicted RBP16.28■□□□□ 0.2
TPBG-202ENST00000535040 DTX3LQ8TDB6 740 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 OXNAD1Q96HP4 312 aaPredicted RBP16.28■□□□□ 0.2
TPBG-202ENST00000535040 APOPT1Q96IL0 206 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 FAM111AQ96PZ2 611 aa16.28■□□□□ 0.2
TPBG-202ENST00000535040 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.28■□□□□ 0.2
TPBG-202ENST00000535040 MAP3K20Q9NYL2 800 aaKnown RBP16.28■□□□□ 0.2
TPBG-202ENST00000535040 VWA5AO00534 786 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 ESRRAP11474 423 aaPredicted RBP16.27■□□□□ 0.2
TPBG-202ENST00000535040 BBS9Q3SYG4 887 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 FOXB2Q5VYV0 432 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 CGRRF1Q99675 332 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 FCHO1O14526 889 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 SNUPNO95149 360 aaKnown RBP16.27■□□□□ 0.2
TPBG-202ENST00000535040 KBTBD2Q8IY47 623 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 KRT82Q9NSB4 513 aa16.27■□□□□ 0.2
TPBG-202ENST00000535040 STRIP2Q9ULQ0 834 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms