RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 C12orf29Q8N999 325 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 OLIG1Q8TAK6 271 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 CYFIP2Q96F07 1278 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 CHP1Q99653 195 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 CLSTN3Q9BQT9 956 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 RHOXF2Q9BQY4 288 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 TACO1Q9BSH4 297 aaKnown RBP13□□□□□ -0.33
SCARB1-204ENST00000535005 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
SCARB1-204ENST00000535005 TLR9Q9NR96 1032 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 GTF3C4Q9UKN8 822 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 MTUS1Q9ULD2 1270 aa13□□□□□ -0.33
SCARB1-204ENST00000535005 CXCL14O95715 111 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 CALCAP01258 141 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 BRD2P25440 801 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 PSMC1P62191 440 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 ASTE1Q2TB18 679 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 MDH1BQ5I0G3 518 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 PAQR9Q6ZVX9 377 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 CCDC91Q7Z6B0 441 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 MRPL43Q8N983 215 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 SLC20A1Q8WUM9 679 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TMEM209Q96SK2 561 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 B3GNT5Q9BYG0 378 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 PLXNA4Q9HCM2 1894 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TMEM265A0A087WTH1 108 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 C2CD2LO14523 706 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 SYF2O95926 243 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 C1RP00736 705 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 PLEKP08567 350 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 EIF4A3P38919 411 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 KRT83P78385 493 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 FMO1Q01740 532 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 RAB33AQ14088 237 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TDRD12Q587J7 1177 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 PPP1R26Q5T8A7 1209 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 C4orf50Q6ZRC1 276 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 CCDC170Q8IYT3 715 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 FUKQ8N0W3 1084 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 SLC30A5Q8TAD4 765 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 FAM76AQ8TAV0 307 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 C2orf15Q8WU43 125 aaKnown RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 PCED1BQ96HM7 432 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 FUBP3Q96I24 572 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TCF25Q9BQ70 676 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 LPIN3Q9BQK8 851 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 LHX5Q9H2C1 402 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 NHEJ1Q9H9Q4 299 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-204ENST00000535005 FAM49BQ9NUQ9 324 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TMLHEQ9NVH6 421 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 CDY1Q9Y6F8 540 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
SCARB1-204ENST00000535005 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 ADAM12O43184 909 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 ABLIM3O94929 683 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 MMEP08473 750 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 TNFAIP3P21580 790 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 CDH5P33151 784 aaPredicted RBP12.98□□□□□ -0.33
SCARB1-204ENST00000535005 OR1D2P34982 312 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 NDUFV1P49821 464 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 CFAP221Q4G0U5 840 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 PKDCCQ504Y2 493 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 TPGS2Q68CL5 300 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 VPS36Q86VN1 386 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 ANKRD52Q8NB46 1076 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 SLC2A14Q8TDB8 520 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 AUTS2Q8WXX7 1259 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 MYLPFQ96A32 169 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 CCDC42Q96M95 316 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 TSPAN16Q9UKR8 245 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 SAR1BQ9Y6B6 198 aa12.98□□□□□ -0.33
SCARB1-204ENST00000535005 C2orf71A6NGG8 1288 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 GOLGA8KD6RF30 607 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 DDX3XO00571 662 aaKnown RBP eCLIP12.97□□□□□ -0.333e-8■■■■□ 25.9
SCARB1-204ENST00000535005 TEX28O15482 410 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 MICAL2O94851 1124 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 LSM8O95777 96 aaKnown RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 CYP1A1P04798 512 aaPredicted RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 CFHP08603 1231 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 OR4Q2P0C623 313 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 CCDC130P13994 396 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 CPB1P15086 417 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 RPL17P18621 184 aaKnown RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ROR1Q01973 937 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 GLYCTKQ8IVS8 523 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 NOA1Q8NC60 698 aaKnown RBP12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ZNF461Q8TAF7 563 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 SPPL2BQ8TCT7 592 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 KLHL5Q96PQ7 755 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 PCDHB18PQ96TA0 734 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
SCARB1-204ENST00000535005 ZNF518BQ9C0D4 1074 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms