RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	DISP2	A7MBM2	1401 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FOXN3	O00409	490 aa	Predicted RBP	16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	GGCX	P38435	758 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ZPBP2	Q6X784	338 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PRUNE1	Q86TP1	453 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PPIL6	Q8IXY8	311 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	STAMBPL1	Q96FJ0	436 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	NMRK2	Q9NPI5	230 aa		16.34	■□□□□ 0.21
NCAPD3-213	ENST00000534532	UMODL1	Q5DID0	1318 aa		16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	EFCAB14	O75071	495 aa		16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ZC3H12B	Q5HYM0	836 aa	Known RBP	16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CLEC17A	Q6ZS10	378 aa		16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	C15orf52	Q6ZUT6	534 aa	Known RBP	16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	APBA2	Q99767	749 aa		16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	NRCAM	Q92823	1304 aa		16.33	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TMEM88B	A6NKF7	163 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PPP1R3G	B7ZBB8	358 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GOLGA8R	I6L899	631 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CAND2	O75155	1236 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PCDH8	O95206	1070 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CCR1	P32246	355 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RAP1GDS1	P52306	607 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	REM2	Q8IYK8	340 aa	Predicted RBP	16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	C9orf72	Q96LT7	481 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ADGRE3	Q9BY15	652 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	BRD8	Q9H0E9	1235 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	WWOX	Q9NZC7	414 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TIMM13	Q9Y5L4	95 aa	Predicted RBP	16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SYCE1L	A8MT33	242 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CBX4	O00257	560 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SNRPA	P09012	282 aa	Known RBP	16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CASP4	P49662	377 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RARRES1	P49788	294 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TP53BP2	Q13625	1128 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RASGRP2	Q7LDG7	609 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PHACTR4	Q8IZ21	702 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ATP6V1G3	Q96LB4	118 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CNPY3	Q9BT09	278 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	BARX2	Q9UMQ3	279 aa	Predicted RBP	16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	AK9	Q5TCS8	1911 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RERE	Q9P2R6	1566 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZW10	O43264	779 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	KRT16	P08779	473 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	YWHAQ	P27348	245 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	HSPA9	P38646	679 aa	Known RBP	16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	LRRC74A	Q0VAA2	488 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	STX3	Q13277	289 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	BEND6	Q5SZJ8	279 aa	Predicted RBP	16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DSG4	Q86SJ6	1040 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZNF507	Q8TCN5	953 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZNF558	Q96NG5	402 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NFKBIZ	Q9BYH8	718 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SFMBT1	Q9UHJ3	866 aa		16.33	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PON1	P27169	355 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CSE1L	P55060	971 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	POU4F1	Q01851	419 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	LRRC8E	Q6NSJ5	796 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CXCL17	Q6UXB2	119 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TRIM51	Q9BSJ1	452 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ANLN	Q9NQW6	1124 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SNX5	Q9Y5X3	404 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NPM3	O75607	178 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SRP72	O76094	671 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ENDOD1	O94919	500 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	IL10	P22301	178 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RAP1GAP	P47736	663 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	RENBP	P51606	427 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	HDAC4	P56524	1084 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	GRIN1	Q05586	938 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SMARCD1	Q96GM5	515 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ABHD8	Q96I13	439 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TMEM51	Q9NW97	253 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	C6orf203	Q9P0P8	240 aa	Predicted RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CDV3	Q9UKY7	258 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TCRBV5S4A2T	A0A5A2	114 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	VPS26A	O75436	327 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SGPL1	O95470	568 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CYP11B1	P15538	503 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	SGCG	Q13326	291 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CAMK2G	Q13555	558 aa	Predicted RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	LRRC14	Q15048	493 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FBXO38	Q6PIJ6	1188 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	C3orf62	Q6ZUJ4	267 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CCDC149	Q6ZUS6	474 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	VWDE	Q8N2E2	1590 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	TRIML2	Q8N7C3	387 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ELOVL4	Q9GZR5	314 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MRPL17	Q9NRX2	175 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	LNPEP	Q9UIQ6	1025 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	NCKAP1	Q9Y2A7	1128 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	MROH7	Q68CQ1	1323 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	DYRK3	O43781	588 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CRTAM	O95727	393 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PTK7	Q13308	1070 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	FAM83E	Q2M2I3	478 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	PABPC1L	Q4VXU2	614 aa	Known RBP	16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ERAP2	Q6P179	960 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	CCNJL	Q8IV13	435 aa		16.32	■□□□□ 0.2
NCAPD3-213	ENST00000534532	ZNF557	Q8N988	423 aa	Predicted RBP	16.32	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms