RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	HYAL1	Q12794	435 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PICALM	Q13492	652 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	SNRNP48	Q6IEG0	339 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	KLHDC10	Q6PID8	442 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	MPZL3	Q6UWV2	235 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	TMCO2	Q7Z6W1	182 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CAMKK1	Q8N5S9	505 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	SMRP1	Q8NCR6	262 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	GPR156	Q8NFN8	814 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	HOXB13	Q92826	284 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	EDC3	Q96F86	508 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	MSLNL	Q96KJ4	702 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CGRRF1	Q99675	332 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	C17orf80	Q9BSJ5	609 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	OSBPL6	Q9BZF3	934 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	MYH16	Q9H6N6	1097 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	FAM204A	Q9H8W3	233 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	GCM1	Q9NP62	436 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	ZFP64	Q9NPA5	681 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	XPNPEP3	Q9NQH7	507 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	RBM12	Q9NTZ6	932 aa	Known RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	SAE1	Q9UBE0	346 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PCDHB1	Q9Y5F3	818 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PCDHA13	Q9Y5I0	950 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	ZHX2	Q9Y6X8	837 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	COL11A1	P12107	1806 aa	Predicted RBP	5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	MED23	Q9ULK4	1368 aa		5.41	□□□□□ -1.54
ECHDC1-223	ENST00000534442	MYO7A	Q13402	2215 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	OTOG	Q6ZRI0	2925 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	KIF20B	Q96Q89	1820 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442		A0A0G2JNJ9	132 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	BTBD11	A6QL63	1104 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CHGB	P05060	677 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CTSS	P25774	331 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	HTR1B	P28222	390 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	LIMS1	P48059	325 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	NDUFV1	P49821	464 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CDK7	P50613	346 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	ACLY	P53396	1101 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	MLLT6	P55198	1093 aa	Predicted RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	RPS8	P62241	208 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	BRD3	Q15059	726 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	NOMO1	Q15155	1222 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PRR31	Q5SQ13	230 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	GORAB	Q5T7V8	394 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	LMBR1L	Q6UX01	489 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	NPNT	Q6UXI9	565 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	ABHD15	Q6UXT9	468 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PLEKHH3	Q7Z736	793 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	SMC5	Q8IY18	1101 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PIK3C3	Q8NEB9	887 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	NUP133	Q8WUM0	1156 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	HDAC10	Q969S8	669 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	STRBP	Q96SI9	672 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	NAA15	Q9BXJ9	866 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	B3GNT5	Q9BYG0	378 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	COA1	Q9GZY4	146 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	PORCN	Q9H237	461 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	EPC1	Q9H2F5	836 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	EPB41L4B	Q9H329	900 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	ZNF768	Q9H5H4	540 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	DCP1A	Q9NPI6	582 aa	Predicted RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442		Q9UFV3	132 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CDC42EP3	Q9UKI2	254 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	L1RE1	Q9UN81	338 aa		5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	CFAP20	Q9Y6A4	193 aa	Known RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.4	□□□□□ -1.54
ECHDC1-223	ENST00000534442	KIF16B	Q96L93	1317 aa		5.4	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PTPRS	Q13332	1948 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	BOD1L1	Q8NFC6	3051 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PLA2G1B	P04054	148 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	GAA	P10253	952 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ELAVL4	P26378	380 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SERPINB3	P29508	390 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SLC6A9	P48067	706 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	STAT5B	P51692	787 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	MAP2K6	P52564	334 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	AGFG1	P52594	562 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	OS9	Q13438	667 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	EIF4H	Q15056	248 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SWSAP1	Q6NVH7	229 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442		Q6ZVL8	140 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DEFB128	Q7Z7B8	93 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FAM129C	Q86XR2	697 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	C1orf210	Q8IVY1	113 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	NSUN6	Q8TEA1	469 aa	Known RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	ZBTB8A	Q96BR9	441 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	WDR92	Q96MX6	357 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	NEK1	Q96PY6	1258 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	DMRTA2	Q96SC8	542 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	BHMT2	Q9H2M3	363 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	TXNRD2	Q9NNW7	524 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SEMA4G	Q9NTN9	838 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	FBXO10	Q9UK96	956 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	PHTF1	Q9UMS5	762 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	SIK3	Q9Y2K2	1263 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	AFG3L2	Q9Y4W6	797 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	CELSR1	Q9NYQ6	3014 aa		5.39	□□□□□ -1.55
ECHDC1-223	ENST00000534442	MGA	Q8IWI9	3026 aa		5.38	□□□□□ -1.55

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