RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 STKLD1Q8NE28 680 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 TTC8Q8TAM2 541 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 OSCP1Q8WVF1 389 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 SECISBP2LQ93073 1101 aaKnown RBP14.27□□□□□ -0.13
CAPN1-228ENST00000534373 TNIP3Q96KP6 325 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 CYP2S1Q96SQ9 504 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 HPS4Q9NQG7 708 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 ARHGAP26Q9UNA1 814 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 NME7Q9Y5B8 376 aa14.27□□□□□ -0.13
CAPN1-228ENST00000534373 EP300Q09472 2414 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 GVINP1Q7Z2Y8 2422 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 ATP8B3O60423 1300 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 F8VP50 259 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 ATG13O75143 517 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF202O95125 648 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 VNN1O95497 513 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 RPL13P26373 211 aaKnown RBP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 CNR2P34972 360 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 GRSF1Q12849 480 aaKnown RBP eCLIP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 NR1H3Q13133 447 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF77Q15935 545 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 TMEM196Q5HYL7 178 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 INTS8Q75QN2 995 aaKnown RBP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 CPA6Q8N4T0 437 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 ARL14EPQ8N8R7 260 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 ATP2A3Q93084 1043 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 TRPC7Q9HCX4 862 aa14.26□□□□□ -0.13
CAPN1-228ENST00000534373 RBM12Q9NTZ6 932 aaKnown RBP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 DUS2Q9NX74 493 aaKnown RBP14.26□□□□□ -0.13
CAPN1-228ENST00000534373 C2orf78A6NCI8 922 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF840PA6NDX5 716 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 OTOL1A6NHN0 477 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-228ENST00000534373 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-228ENST00000534373 DRD1P21728 446 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 VAMP7P51809 220 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 MCCD1P59942 119 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-228ENST00000534373 USP46P62068 366 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 DLG4P78352 724 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 FOXK2Q01167 660 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 SATB1Q01826 763 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 USP4Q13107 963 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 BECN1Q14457 450 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 FBXO43Q4G163 708 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 WDR44Q5JSH3 913 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 CEP135Q66GS9 1140 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 TRIM68Q6AZZ1 485 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 UNC93AQ86WB7 457 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 NUP93Q8N1F7 819 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 OVCA2Q8WZ82 227 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 SLITRK1Q96PX8 696 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 SLC22A12Q96S37 553 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 ECT2Q9H8V3 914 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 COMMD8Q9NX08 183 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF638Q14966 1978 aaKnown RBP14.25□□□□□ -0.13
CAPN1-228ENST00000534373 OBSL1O75147 1896 aa14.25□□□□□ -0.13
CAPN1-228ENST00000534373 KIF26AQ9ULI4 1882 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-228ENST00000534373 OTOGLQ3ZCN5 2332 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 GREB1Q4ZG55 1949 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 OLFM2O95897 454 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 ASS1P00966 412 aaKnown RBP14.24□□□□□ -0.13
CAPN1-228ENST00000534373 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 TRIM21P19474 475 aaKnown RBP14.24□□□□□ -0.13
CAPN1-228ENST00000534373 NR2F2P24468 414 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 GJA4P35212 333 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 PSMC2P35998 433 aaKnown RBP14.24□□□□□ -0.13
CAPN1-228ENST00000534373 IFNAR2P48551 515 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 CDH8P55286 799 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 SLC7A9P82251 487 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 TAF10Q12962 218 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 ADAM9Q13443 819 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 LONP2Q86WA8 852 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 CCDC26Q8TAB7 109 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 RIN3Q8TB24 985 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 SH3RF2Q8TEC5 729 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 HINFPQ9BQA5 517 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF518BQ9C0D4 1074 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 SMYD3Q9H7B4 428 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 IL37Q9NZH6 218 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 NCDNQ9UBB6 729 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 SMG5Q9UPR3 1016 aaKnown RBP14.24□□□□□ -0.13
CAPN1-228ENST00000534373 ZNF292O60281 2723 aa14.24□□□□□ -0.13
CAPN1-228ENST00000534373 PTPRDP23468 1912 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 CCDC163A0A0D9SF12 145 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 CHURC1-FNTBB4DL54 471 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 K7ESF4 209 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 AKAP3O75969 853 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 KRT13P13646 458 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 ARSAP15289 507 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 YWHAQP27348 245 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 ID4P47928 161 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 GALK1P51570 392 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 NUCB2P80303 420 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 EML3Q32P44 896 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms