RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 UBN1Q9NPG3 1134 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 FAM207AQ9NSI2 230 aaPredicted RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 DPP3Q9NY33 737 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 CEP72Q9P209 647 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 SIX4Q9UIU6 781 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 AJAP1Q9UKB5 411 aaPredicted RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 UBQLN1Q9UMX0 589 aaKnown RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 RAXQ9Y2V3 346 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 DAAM1Q9Y4D1 1078 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 SCN1AP35498 2009 aa6.58□□□□□ -1.36
CMTM1-220ENST00000534143 FNDC1Q4ZHG4 1894 aaPredicted RBP6.58□□□□□ -1.36
CMTM1-220ENST00000534143 A0A096LPE4 126 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ABHD14A-ACY1A0A1B0GW23 586 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 A0A1W2PPZ6 126 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ARL5CA6NH57 179 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 AKR1B15C9JRZ8 316 aaPredicted RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 XPOTO43592 962 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 MFAP3LO75121 409 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ASS1P00966 412 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ITGB3P05106 788 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 CSF2RAP15509 400 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 TRIM21P19474 475 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 LRPAP1P30533 357 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 HNRNPH3P31942 346 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 KRT9P35527 623 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 PIK3CAP42336 1068 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 GUCY2FP51841 1108 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ADKP55263 362 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 JAM2P57087 298 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 MYL6P60660 151 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 POLR2FP61218 127 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ZBED6P86452 979 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 SOX4Q06945 474 aaPredicted RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 GOLGA8FQ08AF8 430 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 GOLGA8DPQ0D2H9 430 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 LRMPQ12912 555 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 BIRC3Q13489 604 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 SGSM1Q2NKQ1 1148 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 GLRA4Q5JXX5 417 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 CLLU1OSQ5K130 101 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 IQCEQ6IPM2 695 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 GJB7Q6PEY0 223 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 DEFB128Q7Z7B8 93 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 LRRC8AQ8IWT6 810 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 RPUSD2Q8IZ73 545 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM199Q8N511 208 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 BEST2Q8NFU1 509 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 CPLX3Q8WVH0 158 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 TAF4BQ92750 862 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 KAT5Q92993 513 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 C18orf25Q96B23 403 aaPredicted RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ALKBH8Q96BT7 664 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 FAXDC2Q96IV6 333 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 DMRTB1Q96MA1 342 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 NT5C1BQ96P26 610 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 PI4K2AQ9BTU6 479 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 HTATIP2Q9BUP3 242 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 STK33Q9BYT3 514 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 GPR88Q9GZN0 384 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 NIF3L1Q9GZT8 377 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 XYLT2Q9H1B5 865 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 RSAD1Q9HA92 442 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 APOBEC3GQ9HC16 384 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 NLRC4Q9NPP4 1024 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 PRDM5Q9NQX1 630 aaPredicted RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 TMEM161AQ9NX61 479 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 APEX2Q9UBZ4 518 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 TUBGCP4Q9UGJ1 667 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 DNAJC12Q9UKB3 198 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 ITGA11Q9UKX5 1188 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 MYO6Q9UM54 1294 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 LUC7L2Q9Y383 392 aaKnown RBP6.57□□□□□ -1.36
CMTM1-220ENST00000534143 NUB1Q9Y5A7 615 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 FHOD1Q9Y613 1164 aa6.57□□□□□ -1.36
CMTM1-220ENST00000534143 UNC80Q8N2C7 3258 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 PTPRSQ13332 1948 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 PIRO00625 290 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 PPEF2O14830 753 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-220ENST00000534143 THP07101 528 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 PFKMP08237 780 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 TPM1P09493 284 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 FSTP19883 344 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 POLR2BP30876 1174 aaKnown RBP6.56□□□□□ -1.36
CMTM1-220ENST00000534143 ATICP31939 592 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 GTF2F1P35269 517 aaKnown RBP eCLIP6.56□□□□□ -1.36
CMTM1-220ENST00000534143 MLH1P40692 756 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 GRIA4P48058 902 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 SCNN1GP51170 649 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 RBP5P82980 135 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 CCZ1BP86790 482 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 CCZ1P86791 482 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-220ENST00000534143 GCNT1Q02742 428 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 TRPC3Q13507 836 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 DRAP1Q14919 205 aaPredicted RBP6.56□□□□□ -1.36
CMTM1-220ENST00000534143 MEA1Q16626 185 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 C9orf57Q5W0N0 161 aa6.56□□□□□ -1.36
CMTM1-220ENST00000534143 E4F1Q66K89 784 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms