RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 TASP1Q9H6P5 420 aa14.2□□□□□ -0.14
CMTM1-219ENST00000533953 TRPC7Q9HCX4 862 aa14.2□□□□□ -0.14
CMTM1-219ENST00000533953 CHORDC1Q9UHD1 332 aaPredicted RBP14.2□□□□□ -0.14
CMTM1-219ENST00000533953 ZFP37Q9Y6Q3 630 aaPredicted RBP14.2□□□□□ -0.14
CMTM1-219ENST00000533953 DOCK8Q8NF50 2099 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 SYCE3A1L190 88 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 C2orf78A6NCI8 922 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 TMEM221A6NGB7 291 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 M0R296 226 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 TNFRSF10BO14763 440 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 TRIM66O15016 1216 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ABL1P00519 1130 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 CD19P15391 556 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 PON1P27169 355 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 CDC25CP30307 473 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 TAF10Q12962 218 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 NCAPHQ15003 741 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ARHGAP44Q17R89 818 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ARHGAP15Q53QZ3 475 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-219ENST00000533953 CDKAL1Q5VV42 579 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 VITQ6UXI7 678 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 GBP6Q6ZN66 633 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 CLEC20AQ6ZU45 233 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 FAM114A1Q8IWE2 563 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 AOPEPQ8N6M6 819 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 TTC16Q8NEE8 873 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 UBA3Q8TBC4 463 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ASIC4Q96FT7 647 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 SMARCD1Q96GM5 515 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 GCNAQ96QF7 691 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ZFP14Q9HCL3 533 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 SIX2Q9NPC8 291 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 DMAP1Q9NPF5 467 aaPredicted RBP14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ACP6Q9NPH0 428 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 CCL26Q9Y258 94 aa14.19□□□□□ -0.14
CMTM1-219ENST00000533953 ATP8B3O60423 1300 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 HEPACAM2A8MVW5 462 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 HHLA1C9JL84 531 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 TULP2O00295 520 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 FAM200BP0CF97 657 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 TBXAS1P24557 533 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-219ENST00000533953 SLC5A3P53794 718 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 SIGLEC14Q08ET2 396 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 KCNMA1Q12791 1236 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 KRT31Q15323 416 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 EXOC3L4Q17RC7 722 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 GOLGA7BQ2TAP0 167 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 DPY19L2P1Q6NXN4 242 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 TRIM65Q6PJ69 517 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 HFE2Q6ZVN8 426 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 MTSS1LQ765P7 747 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 NUP93Q8N1F7 819 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 ARL14EPQ8N8R7 260 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-219ENST00000533953 RBBP8NLQ8NC74 664 aaPredicted RBP14.18□□□□□ -0.14
CMTM1-219ENST00000533953 RIN3Q8TB24 985 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 MRPS31Q92665 395 aaKnown RBP14.18□□□□□ -0.14
CMTM1-219ENST00000533953 TRMT2BQ96GJ1 504 aaKnown RBP14.18□□□□□ -0.14
CMTM1-219ENST00000533953 FAXDC2Q96IV6 333 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 LRFN3Q9BTN0 628 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 TTLL2Q9BWV7 592 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 HSD3B7Q9H2F3 369 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 CA14Q9ULX7 337 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 DUSP12Q9UNI6 340 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 MUC3AQ02505 3323 aa14.18□□□□□ -0.14
CMTM1-219ENST00000533953 ECI2O75521 394 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 FGF19O95750 216 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 PNMA6AP0CW24 399 aaPredicted RBP14.17□□□□□ -0.14
CMTM1-219ENST00000533953 KRT5P13647 590 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 BRD2P25440 801 aaKnown RBP14.17□□□□□ -0.14
CMTM1-219ENST00000533953 YWHAQP27348 245 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 KLK7P49862 253 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 MYL5Q02045 173 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 TMEM31Q5JXX7 168 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 ARHGAP17Q68EM7 881 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 MON1AQ86VX9 555 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 TTC30AQ86WT1 665 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 UBALD2Q8IYN6 164 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 CMTM8Q8IZV2 173 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 TTC8Q8TAM2 541 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 USP13Q92995 863 aaPredicted RBP14.17□□□□□ -0.14
CMTM1-219ENST00000533953 NXPE3Q969Y0 559 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 ELSPBP1Q96BH3 223 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 ZFYVE19Q96K21 471 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 FUCA2Q9BTY2 467 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 DUSP16Q9BY84 665 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 GPR88Q9GZN0 384 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 RNF38Q9H0F5 515 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 CSNK1G1Q9HCP0 422 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 GMIPQ9P107 970 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 FBXL21Q9UKT6 434 aa14.17□□□□□ -0.14
CMTM1-219ENST00000533953 TECTAO75443 2155 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 KRBA1A5PL33 1030 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 ZNF840PA6NDX5 716 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 GPR37L1O60883 481 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 SRFP11831 508 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 ATP1A3P13637 1013 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 EEF1GP26641 437 aaKnown RBP14.16□□□□□ -0.14
CMTM1-219ENST00000533953 GDI1P31150 447 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms