RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 CES5AQ6NT32 575 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 PPP1R2P3Q6NXS1 205 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 NOP9Q86U38 636 aaKnown RBP16.48■□□□□ 0.23
CTTN-215ENST00000533931 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 ZMIZ2Q8NF64 920 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 OR8K1Q8NGG5 319 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 KCTD13Q8WZ19 329 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 HSFY1Q96LI6 401 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 ZNF512Q96ME7 567 aaPredicted RBP16.48■□□□□ 0.23
CTTN-215ENST00000533931 NECTIN4Q96NY8 510 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 TTLL2Q9BWV7 592 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 S1PR5Q9H228 398 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 IL37Q9NZH6 218 aa16.48■□□□□ 0.23
CTTN-215ENST00000533931 UXTQ9UBK9 157 aaPredicted RBP16.48■□□□□ 0.23
CTTN-215ENST00000533931 NCANO14594 1321 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 CCDC195A0A1B0GUA6 201 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 FAM92AA1XBS5 289 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 AKR1B15C9JRZ8 316 aaPredicted RBP16.47■□□□□ 0.23
CTTN-215ENST00000533931 M0QYV0 167 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 TNFRSF10BO14763 440 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 RFPL2O75678 378 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 MTHFRP42898 656 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 GPD2P43304 727 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 RPL34P49207 117 aaKnown RBP16.47■□□□□ 0.23
CTTN-215ENST00000533931 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
CTTN-215ENST00000533931 GSE1Q14687 1217 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 DDR2Q16832 855 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 PUS10Q3MIT2 529 aaKnown RBP16.47■□□□□ 0.23
CTTN-215ENST00000533931 DENND5BQ6ZUT9 1274 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 NUP93Q8N1F7 819 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 SCML4Q8N228 414 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 TMEM35BQ8NCS4 154 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 SLC35F5Q8WV83 523 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 RIPOR3Q96MK2 946 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 NOX5Q96PH1 765 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 SYT11Q9BT88 431 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 FBXO44Q9H4M3 255 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 ACP6Q9NPH0 428 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 TMEM30AQ9NV96 361 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 CD207Q9UJ71 328 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 PTPRDP23468 1912 aa16.47■□□□□ 0.23
CTTN-215ENST00000533931 MTCL1Q9Y4B5 1905 aaKnown RBP16.47■□□□□ 0.23
CTTN-215ENST00000533931 MYO7AQ13402 2215 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 SLC38A8A6NNN8 435 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 SOBPA7XYQ1 873 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 HHLA1C9JL84 531 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 SERPING1P05155 500 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 PTPN2P17706 415 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 PPP3CCP48454 512 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 MAP3K7CLP57077 242 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 SNX16P57768 344 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 CDK17Q00537 523 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 DLX2Q07687 328 aaPredicted RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 PDE4CQ08493 712 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 SMAD4Q13485 552 aaKnown RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 SKIV2LQ15477 1246 aaKnown RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 CCDC85BQ15834 202 aaPredicted RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 TSR1Q2NL82 804 aaKnown RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 LEXMQ3ZCV2 418 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 RAB41Q5JT25 222 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 DNAJB7Q7Z6W7 309 aaPredicted RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 PIGZQ86VD9 579 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 OVCA2Q8WZ82 227 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 SMG7Q92540 1137 aaKnown RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 KCNK16Q96T55 309 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 ABHD10Q9NUJ1 306 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 ZNHIT6Q9NWK9 470 aaKnown RBP16.46■□□□□ 0.23
CTTN-215ENST00000533931 ZMYM5Q9UJ78 669 aa16.46■□□□□ 0.23
CTTN-215ENST00000533931 GOLGA6L6A8MZA4 724 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 CCL16O15467 120 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 SOAT2O75908 522 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 BEST1O76090 585 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 HMGA1P17096 107 aaKnown RBP16.45■□□□□ 0.22
CTTN-215ENST00000533931 ACADSBP45954 432 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 KLHL30Q0D2K2 578 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 TAF12Q16514 161 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 RARS2Q5T160 578 aaKnown RBP16.45■□□□□ 0.22
CTTN-215ENST00000533931 E4F1Q66K89 784 aaPredicted RBP16.45■□□□□ 0.22
CTTN-215ENST00000533931 HGSNATQ68CP4 663 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 DENND1BQ6P3S1 775 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 TMC5Q6UXY8 1006 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 VPS36Q86VN1 386 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 MSANTD4Q8NCY6 345 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 PDZD8Q8NEN9 1154 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 CPLX3Q8WVH0 158 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 SUSD6Q92537 303 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 SECISBP2LQ93073 1101 aaKnown RBP16.45■□□□□ 0.22
CTTN-215ENST00000533931 AGPAT1Q99943 283 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 MIS12Q9H081 205 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 PDCL3Q9H2J4 239 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 PIDD1Q9HB75 910 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 ASAH2Q9NR71 780 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 FAM50BQ9Y247 325 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 USP3Q9Y6I4 520 aa16.45■□□□□ 0.22
CTTN-215ENST00000533931 ZNF197O14709 1029 aa16.44■□□□□ 0.22
CTTN-215ENST00000533931 CYP1A1P04798 512 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms