RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 E2F8A0AVK6 867 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 K7ENP7 123 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 LDOC1O95751 146 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-215ENST00000533818 POU3F2P20265 443 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-215ENST00000533818 GLDCP23378 1020 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 NTSR1P30989 418 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 RARRES1P49788 294 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 CCT8P50990 548 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 TLE1Q04724 770 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 DHCR24Q15392 516 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 INF2Q27J81 1249 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 DCAF12L1Q5VU92 463 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 INO80CQ6PI98 192 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-215ENST00000533818 C12orf40Q86WS4 652 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 ARL14EPQ8N8R7 260 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-215ENST00000533818 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
CSDE1-215ENST00000533818 DPH1Q9BZG8 443 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 SLC6A17Q9H1V8 727 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 TTC12Q9H892 705 aaPredicted RBP11.43□□□□□ -0.58
CSDE1-215ENST00000533818 LRRC4CQ9HCJ2 640 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 KCNMB3Q9NPA1 279 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 KNL1Q8NG31 2342 aa11.43□□□□□ -0.58
CSDE1-215ENST00000533818 STK36Q9NRP7 1315 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 BLACEA4D250 179 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CLEC18AA5D8T8 446 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 METTL12A8MUP2 240 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CBX4O00257 560 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 LYPLA2O95372 231 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CSH1P0DML2 217 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CSH2P0DML3 217 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 HAPLN1P10915 354 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 TYMPP19971 482 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 AFF3P51826 1226 aaKnown RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 NLRP5P59047 1200 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 SDE2Q6IQ49 451 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CLEC18BQ6UXF7 455 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 KIAA1324Q6UXG2 1013 aaKnown RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CLEC18CQ8NCF0 446 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 STKLD1Q8NE28 680 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 OR10T2Q8NGX3 314 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 PIGOQ8TEQ8 1089 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 IGSF8Q969P0 613 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CNDP2Q96KP4 475 aaKnown RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 MRGPRX1Q96LB2 322 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 MTMR9Q96QG7 549 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 CDT1Q9H211 546 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 WSB2Q9NYS7 404 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 VPS54Q9P1Q0 977 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 NAP1L2Q9ULW6 460 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-215ENST00000533818 TNFSF13BQ9Y275 285 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 ANKRD6Q9Y2G4 727 aa11.42□□□□□ -0.58
CSDE1-215ENST00000533818 A0A087WWV3 80 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 H0Y8X5 98 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 PRPF3O43395 683 aaKnown RBP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 TADA3O75528 432 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 TCF3P15923 654 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 HDCP19113 662 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 ATP2B1P20020 1258 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 AARSP49588 968 aaKnown RBP eCLIP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 EFNA5P52803 228 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 IL9RQ01113 521 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 KCNB1Q14721 858 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 TEAD4Q15561 434 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 FILIP1Q7Z7B0 1213 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 MIB1Q86YT6 1006 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 CACTIN-AS1Q8N1I8 211 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 TMEM130Q8N3G9 435 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 MCPH1Q8NEM0 835 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 SPPL2BQ8TCT7 592 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 EIF2AK1Q9BQI3 630 aaKnown RBP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 ZCWPW1Q9H0M4 648 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 CD248Q9HCU0 757 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 ABI2Q9NYB9 513 aaPredicted RBP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 GCNT4Q9P109 453 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 UXTQ9UBK9 157 aaPredicted RBP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 ARHGAP26Q9UNA1 814 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 CLCA2Q9UQC9 943 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 ZNF638Q14966 1978 aaKnown RBP11.41□□□□□ -0.58
CSDE1-215ENST00000533818 TRIP11Q15643 1979 aa11.41□□□□□ -0.58
CSDE1-215ENST00000533818 LRBAP50851 2863 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 KLF18A0A0U1RQI7 1052 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 CCDC196A0A1B0GTZ2 297 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 ADH1CP00326 375 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 NFICP08651 508 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 NAMPTP43490 491 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 ACADVLP49748 655 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
CSDE1-215ENST00000533818 ZNF568Q3ZCX4 644 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 C10orf76Q5T2E6 689 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 RHBDF2Q6PJF5 856 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 PADI6Q6TGC4 694 aa11.4□□□□□ -0.58
CSDE1-215ENST00000533818 XKR5Q6UX68 686 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms