RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 GPR63Q9BZJ6 419 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 INHAP05111 366 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 RHOCP08134 193 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 MMP3P08254 477 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ELNP15502 786 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 VCLP18206 1134 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CCL23P55773 120 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 MYL6P60660 151 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 FMR1Q06787 632 aaKnown RBP eCLIP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 NR1I3Q14994 352 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 FIGNQ5HY92 759 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 LCA5Q86VQ0 697 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 MIB1Q86YT6 1006 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC35G2Q8TBE7 412 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 OLFM3Q96PB7 478 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ATXN3LQ9H3M9 355 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 MFSD1Q9H3U5 465 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 TBK1Q9UHD2 729 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 PHF20L1A8MW92 1017 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 PIK3R2O00459 728 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 GYG2O15488 501 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 NDUFS3O75489 264 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ICAM3P32942 547 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 PSEN1P49768 467 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CENPCQ03188 943 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 NSUN2Q08J23 767 aaKnown RBP eCLIP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 TBCCQ15814 346 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 RASSF3Q86WH2 238 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 OOSP2Q86WS3 158 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 KCNV2Q8TDN2 545 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 COPS5Q92905 334 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ACSF2Q96CM8 615 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SARS2Q9NP81 518 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ABCF3Q9NUQ8 709 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SNX24Q9Y343 169 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 COL1A1P02452 1464 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 GPR25O00155 361 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 PSTPIP1O43586 416 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ESRRBO95718 433 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 COPS2P61201 443 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 GCNT1Q02742 428 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SEZ6Q53EL9 994 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 AARS2Q5JTZ9 985 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CNPY3Q9BT09 278 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 NCAM2O15394 837 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 EEF1B2P24534 225 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CCR1P32246 355 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 EFEMP1Q12805 493 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SV2AQ7L0J3 742 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 ENGASEQ8NFI3 743 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 COG1Q8WTW3 980 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SNX19Q92543 992 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 THOC1Q96FV9 657 aaKnown RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 MTMR9Q96QG7 549 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 GAD1Q99259 594 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 PRDM16Q9HAZ2 1276 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 SRRDQ9UH36 339 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 DERAQ9Y315 318 aa11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 CICQ96RK0 1608 aaPredicted RBP11.72□□□□□ -0.53
AMBRA1-211ENST00000533727 WTIPA6NIX2 430 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 CSH1P0DML2 217 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 CSH2P0DML3 217 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 FDFT1P37268 417 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 MTFR1Q15390 333 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 ACBD5Q5T8D3 534 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 IZUMO3Q5VZ72 239 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 PSRC1Q6PGN9 363 aaPredicted RBP11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 DCLRE1AQ6PJP8 1040 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 STAMBPL1Q96FJ0 436 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 SERPINI1Q99574 410 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 SPATA16Q9BXB7 569 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 ARHGAP10A1A4S6 786 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 OR6C75A6NL08 312 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 HSPA4LO95757 839 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 AKAP5P24588 427 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 ARSEP51690 589 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 IMPG1Q17R60 797 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 TMTC4Q5T4D3 741 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 HACD3Q9P035 362 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 ZFATQ9P243 1243 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 Q9Y3F1 56 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 C2CD2Q9Y426 696 aa11.71□□□□□ -0.53
AMBRA1-211ENST00000533727 LACTBL1A8MY62 500 aa11.71□□□□□ -0.54
AMBRA1-211ENST00000533727 TKTL1P51854 596 aa11.71□□□□□ -0.54
AMBRA1-211ENST00000533727 PTENP60484 403 aa11.71□□□□□ -0.54
AMBRA1-211ENST00000533727 PPP2R2AP63151 447 aa11.71□□□□□ -0.54
AMBRA1-211ENST00000533727 AMHR2Q16671 573 aa11.71□□□□□ -0.54
AMBRA1-211ENST00000533727 HASPINQ8TF76 798 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms