RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 HPS4Q9NQG7 708 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 KCNQ5Q9NR82 932 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 SMPD4Q9NXE4 827 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 DBR1Q9UK59 544 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 AAR2Q9Y312 384 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 E9PCH4 1651 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 SALL1Q9NSC2 1324 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 CNTNAP2Q9UHC6 1331 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 PPP1R3GB7ZBB8 358 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 XYLBO75191 536 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 MAP3K6O95382 1288 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 KRT16P08779 473 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 SHMT1P34896 483 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 ADCYAP1R1P41586 468 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 KCNJ1P48048 391 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 SOX10P56693 466 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 OCA2Q04671 838 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 IKBKEQ14164 716 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 PLCL1Q15111 1095 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 C3orf67Q6ZVT6 689 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 STX19Q8N4C7 294 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 HES6Q96HZ4 224 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 MRPL1Q9BYD6 325 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 ZNF518BQ9C0D4 1074 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 RIOX1Q9H6W3 641 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 DDX43Q9NXZ2 648 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 GRID1Q9ULK0 1009 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 PCDHB5Q9Y5E4 795 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 LRRIQ3A6PVS8 624 aaPredicted RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 TCP11X1B4DZS4 312 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 HOXC6P09630 235 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 CXCL8P10145 99 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 PTPN7P35236 360 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 CARSP49589 748 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 ALDH5A1P51649 535 aaPredicted RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 ITGA8P53708 1063 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 CNTN2Q02246 1040 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 SP3Q02447 781 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 KDSRQ06136 332 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 DDX39BQ13838 428 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 HIC1Q14526 733 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 PDK2Q15119 407 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 PPM1LQ5SGD2 360 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 RD3Q7Z3Z2 195 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 REPS2Q8NFH8 660 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 MRPL9Q9BYD2 267 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 RANBP17Q9H2T7 1088 aaKnown RBP6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 DCCP43146 1447 aa6.63□□□□□ -1.35
UBQLN1-206ENST00000533705 MEGF6O75095 1541 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PSTPIP1O43586 416 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SRP72O76094 671 aaKnown RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SGPL1O95470 568 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 GYPCP04921 128 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TGM2P21980 687 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 RFX3P48380 749 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 MAP3K10Q02779 954 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TP53BP2Q13625 1128 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 VGLL4Q14135 290 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 KYNUQ16719 465 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM83EQ2M2I3 478 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TTC39BQ5VTQ0 682 aaPredicted RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SLC30A10Q6XR72 485 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SPATA21Q7Z572 469 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 CCDC33Q8N5R6 958 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PCYOX1LQ8NBM8 494 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 CSGALNACT1Q8TDX6 532 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 FAM172AQ8WUF8 416 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TRAPPC12Q8WVT3 735 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SGSM3Q96HU1 749 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 THAP2Q9H0W7 228 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TLR8Q9NR97 1041 aaKnown RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 MRGBPQ9NV56 204 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TRIM10Q9UDY6 481 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 MARCOQ9UEW3 520 aaPredicted RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PNMA8BQ9ULN7 279 aaPredicted RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SPACA6W5XKT8 324 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 FKBP9O95302 570 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 ALOX15P16050 662 aaPredicted RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PON1P27169 355 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PLA2G4AP47712 749 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 MYL6P60660 151 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 VSNL1P62760 191 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 C2CD6Q53TS8 623 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 FKBP9P1Q75LS8 142 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TMEM176AQ96HP8 235 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 CDK5RAP1Q96SZ6 601 aaKnown RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 SYT15Q9BQS2 421 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 ECT2Q9H8V3 914 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 RAD18Q9NS91 495 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PFDN1O60925 122 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 ITGALP20701 1170 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 TKTL1P51854 596 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PTPN11Q06124 597 aaPredicted RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 CYP24A1Q07973 514 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 BST2Q10589 180 aaKnown RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 PLD1Q13393 1074 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 CAMK2GQ13555 558 aaPredicted RBP6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 CLEC16AQ2KHT3 1053 aa6.62□□□□□ -1.35
UBQLN1-206ENST00000533705 RARS2Q5T160 578 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms