RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	GCNT4	Q9P109	453 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	NDRG2	Q9UN36	371 aa	Known RBP	18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	ANAPC1	Q9H1A4	1944 aa		18.82	■□□□□ 0.6
BBS1-223	ENST00000533644	CACNA1I	Q9P0X4	2223 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	TRAV19	A0A0A6YYK7	116 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	CLDN5	O00501	218 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	CETN3	O15182	167 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	CCNE1	P24864	410 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	CTH	P32929	405 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	SOX9	P48436	509 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	INCA1	Q0VD86	236 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	PAQR9	Q6ZVX9	377 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	FAM35A	Q86V20	835 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	UNC93A	Q86WB7	457 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	RALGPS2	Q86X27	583 aa	Predicted RBP	18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	ADSSL1	Q8N142	457 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	CRYBG2	Q8N1P7	616 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	EEF2KMT	Q96G04	330 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	CHRD	Q9H2X0	955 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	APOBEC3G	Q9HC16	384 aa	Known RBP	18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	TRPC7	Q9HCX4	862 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	HMGXB4	Q9UGU5	601 aa		18.81	■□□□□ 0.6
BBS1-223	ENST00000533644	ATP8B3	O60423	1300 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	C2orf78	A6NCI8	922 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	SPECC1L-ADORA2A	F8WAN1	911 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	CKM	P06732	381 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	USP17L7	P0C7H9	530 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	SP9	P0CG40	484 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	EPB41	P11171	864 aa	Known RBP	18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	PFKL	P17858	780 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	KPNA1	P52294	538 aa	Predicted RBP	18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	NDST1	P52848	882 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	TNK2	Q07912	1038 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	USP4	Q13107	963 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	KRT39	Q6A163	491 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	TXNDC11	Q6PKC3	985 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	ACOT1	Q86TX2	421 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	FUK	Q8N0W3	1084 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	IER2	Q9BTL4	223 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	IMPG2	Q9BZV3	1241 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	NIF3L1	Q9GZT8	377 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	FBXO4	Q9UKT5	387 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	DCHS1	Q96JQ0	3298 aa		18.8	■□□□□ 0.6
BBS1-223	ENST00000533644	ZNF840P	A6NDX5	716 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	PRR23A	A6NEV1	266 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	SLC16A3	O15427	465 aa	Known RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	KIN	O60870	393 aa	Known RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	CHRNB1	P11230	501 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	TCF3	P15923	654 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	PPP3CC	P48454	512 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	PDE6C	P51160	858 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	PMS1	P54277	932 aa	Known RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	LRRC63	Q05C16	580 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ZNF77	Q15935	545 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ITPRIPL2	Q3MIP1	535 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ZNF528	Q3MIS6	628 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ANKRD40	Q6AI12	368 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	MAMSTR	Q6ZN01	415 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ARL14EP	Q8N8R7	260 aa	Predicted RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	SMARCD1	Q96GM5	515 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	CYP2S1	Q96SQ9	504 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	TSG101	Q99816	390 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	CYP3A43	Q9HB55	503 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	DMAP1	Q9NPF5	467 aa	Predicted RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	HPS4	Q9NQG7	708 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	PRMT8	Q9NR22	394 aa	Predicted RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	GKN1	Q9NS71	199 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	TRPM5	Q9NZQ8	1165 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ARHGAP26	Q9UNA1	814 aa		18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	ZNF638	Q14966	1978 aa	Known RBP	18.79	■□□□□ 0.6
BBS1-223	ENST00000533644	LAMTOR5	O43504	91 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	STX10	O60499	249 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	GADD45B	O75293	160 aa	Predicted RBP	18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	OLFM2	O95897	454 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	MXI1	P50539	228 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	FKBP3	Q00688	224 aa	Known RBP	18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	TAF10	Q12962	218 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	MTAP	Q13126	283 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	ORC1	Q13415	861 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	MTF1	Q14872	753 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	WDR44	Q5JSH3	913 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	ASCL5	Q7RTU5	278 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	NUP93	Q8N1F7	819 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	TTC8	Q8TAM2	541 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	SEMA4D	Q92854	862 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	NKD2	Q969F2	451 aa	Predicted RBP	18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	FAXDC2	Q96IV6	333 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	TWNK	Q96RR1	684 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	KCNK16	Q96T55	309 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	MMRN2	Q9H8L6	949 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	LMAN1L	Q9HAT1	526 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	KRT82	Q9NSB4	513 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	MAN1B1	Q9UKM7	699 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	HELZ	P42694	1942 aa	Known RBP	18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	FANCM	Q8IYD8	2048 aa		18.78	■□□□□ 0.6
BBS1-223	ENST00000533644	TRIM49B	A6NDI0	452 aa		18.77	■□□□□ 0.6
BBS1-223	ENST00000533644	TNFRSF10B	O14763	440 aa		18.77	■□□□□ 0.6
BBS1-223	ENST00000533644	PSMA7	O14818	248 aa		18.77	■□□□□ 0.6
BBS1-223	ENST00000533644	RTN3	O95197	1032 aa	Predicted RBP	18.77	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms