RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FSTL4Q6MZW2 842 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 TMEM150AQ86TG1 271 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 KBTBD6Q86V97 674 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 LRRTM3Q86VH5 581 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 EFCAB13Q8IY85 973 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 GUF1Q8N442 669 aaKnown RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 GIPC2Q8TF65 315 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 C2orf15Q8WU43 125 aaKnown RBP9.33□□□□□ -0.92
COPB1-210ENST00000533533 ANKRD36BP1Q96IX9 119 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 FAM84AQ96KN4 292 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 TSG101Q99816 390 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 HPS4Q9NQG7 708 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 RXFP3Q9NSD7 469 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 MAN1B1Q9UKM7 699 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 ANGPTL2Q9UKU9 493 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 FRMD4BQ9Y2L6 1034 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 DERAQ9Y315 318 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 C2CD2Q9Y426 696 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 MYOFQ9NZM1 2061 aa9.33□□□□□ -0.92
COPB1-210ENST00000533533 CYB561D2O14569 222 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 AKAP3O75969 853 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 F11P03951 625 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 ITGB3P05106 788 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 CCDC192P0DO97 292 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 HAPLN1P10915 354 aaPredicted RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 NR2F2P24468 414 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 RPL13P26373 211 aaKnown RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 PMLP29590 882 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 AVPR1AP37288 418 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 PRCPP42785 496 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 TAF6P49848 677 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 NLRP12P59046 1061 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 POU5F1Q01860 360 aaKnown RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 CYP24A1Q07973 514 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 BFSP1Q12934 665 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 RUNX3Q13761 415 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 CCDC6Q16204 474 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 PLA2G2CQ5R387 149 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 N4BP2L1Q5TBK1 243 aaPredicted RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 STPG1Q5TH74 334 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 TRIM68Q6AZZ1 485 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 METTL23Q86XA0 190 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 NT5DC4Q86YG4 428 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 THEM5Q8N1Q8 247 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 MAB21L3Q8N8X9 362 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 SPPL2BQ8TCT7 592 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 USP13Q92995 863 aaPredicted RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 CHFRQ96EP1 664 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 ZC3H10Q96K80 434 aaKnown RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 MTMR12Q9C0I1 747 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 EBF3Q9H4W6 596 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 ABI2Q9NYB9 513 aaPredicted RBP9.32□□□□□ -0.92
COPB1-210ENST00000533533 AGAP1Q9UPQ3 857 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 SLC8A2Q9UPR5 921 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 CCL26Q9Y258 94 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 PCDHGA5Q9Y5G8 931 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 ASPMQ8IZT6 3477 aa9.32□□□□□ -0.92
COPB1-210ENST00000533533 KIAA1549LQ6ZVL6 1849 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 AKAP13Q12802 2813 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 SOBPA7XYQ1 873 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 RNF40O75150 1001 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 PHACTR2O75167 634 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 EGFP01133 1207 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 HMGA1P17096 107 aaKnown RBP9.31□□□□□ -0.92
COPB1-210ENST00000533533 DDX6P26196 483 aaKnown RBP eCLIP9.31□□□□□ -0.923e-6■■■□□ 19.2
COPB1-210ENST00000533533 CASP4P49662 377 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 RBP5P82980 135 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 SHC2P98077 582 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 AMPD2Q01433 879 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 ADAM9Q13443 819 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 BIRC3Q13489 604 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 PSMD6Q15008 389 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 DUOXA2Q1HG44 320 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 SV2CQ496J9 727 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 TXNDC8Q6A555 127 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 C12orf56Q8IXR9 622 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 ELOA2Q8IYF1 753 aaPredicted RBP9.31□□□□□ -0.92
COPB1-210ENST00000533533 DCP1BQ8IZD4 617 aaKnown RBP9.31□□□□□ -0.92
COPB1-210ENST00000533533 CAMKK1Q8N5S9 505 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 OR5B17Q8NGF7 314 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 EEF2KMTQ96G04 330 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 ZNF560Q96MR9 790 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 GTPBP4Q9BZE4 634 aaKnown RBP9.31□□□□□ -0.92
COPB1-210ENST00000533533 NUP62CLQ9H1M0 184 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 MMRN2Q9H8L6 949 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 KIF9Q9HAQ2 790 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 FBRSL1Q9HCM7 1045 aaKnown RBP9.31□□□□□ -0.92
COPB1-210ENST00000533533 LMBRD1Q9NUN5 540 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 TDP1Q9NUW8 608 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 DSPP15924 2871 aaKnown RBP9.31□□□□□ -0.92
COPB1-210ENST00000533533 KNL1Q8NG31 2342 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 PTPRDP23468 1912 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 PTPRJQ12913 1337 aa9.31□□□□□ -0.92
COPB1-210ENST00000533533 KPNA7A9QM74 516 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms