RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 POLMQ9NP87 494 aaPredicted RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 MBD1Q9UIS9 605 aaPredicted RBP13.95□□□□□ -0.18
COPB1-209ENST00000533096 KLK13Q9UKR3 277 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 EXOC7Q9UPT5 735 aa13.95□□□□□ -0.18
COPB1-209ENST00000533096 GCNT3O95395 438 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 APODP05090 189 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 TMEM191BP0C7N4 346 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 ITPKAP23677 461 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 GJB2P29033 226 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 WASP42768 502 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 KDSRQ06136 332 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 RHBDF2Q6PJF5 856 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 SYT12Q8IV01 421 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 HDDC3Q8N4P3 179 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 CHCHD4Q8N4Q1 142 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 SPATA18Q8TC71 538 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 WHAMMQ8TF30 809 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
COPB1-209ENST00000533096 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 EPSTI1Q96J88 318 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 SPACA7Q96KW9 195 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 PKMYT1Q99640 499 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 SYT15Q9BQS2 421 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
COPB1-209ENST00000533096 ARHGEF4Q9NR80 690 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 CPQQ9Y646 472 aa13.94□□□□□ -0.18
COPB1-209ENST00000533096 TCRBV21S2A2A0A5A6 115 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 TBC1D3BA6NDS4 549 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 TMEM8BA6NDV4 472 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 TNFRSF10BO14763 440 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 SLC26A4O43511 780 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 KAT7O95251 611 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 LDHAP00338 332 aaKnown RBP13.93□□□□□ -0.18
COPB1-209ENST00000533096 CYP17A1P05093 508 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 IDEP14735 1019 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 RDXP35241 583 aaKnown RBP13.93□□□□□ -0.18
COPB1-209ENST00000533096 LONP1P36776 959 aaKnown RBP13.93□□□□□ -0.18
COPB1-209ENST00000533096 P2RY2P41231 377 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 PDE6CP51160 858 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 POU5F1Q01860 360 aaKnown RBP13.93□□□□□ -0.18
COPB1-209ENST00000533096 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
COPB1-209ENST00000533096 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 RESTQ13127 1097 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 BYSLQ13895 437 aaKnown RBP13.93□□□□□ -0.18
COPB1-209ENST00000533096 GAB4Q2WGN9 574 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 EOGTQ5NDL2 527 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 LYSMD4Q5XG99 296 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 FAM171BQ6P995 826 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 C19orf48Q6RUI8 117 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 DENND5BQ6ZUT9 1274 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 TOP6BLQ8N6T0 577 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 OLIG1Q8TAK6 271 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 HPDLQ96IR7 371 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 KIF2CQ99661 725 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 MTMR12Q9C0I1 747 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 ST6GALNAC4Q9H4F1 302 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 CRTAC1Q9NQ79 661 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 GDAP2Q9NXN4 497 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 SLC6A14Q9UN76 642 aa13.93□□□□□ -0.18
COPB1-209ENST00000533096 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 ZNF840PA6NDX5 716 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 SLC9A3R1O14745 358 aaPredicted RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 GABRDO14764 452 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 MAGEA11P43364 429 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 FAM193AP78312 1265 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 RPL6Q02878 288 aaKnown RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 TAF10Q12962 218 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 ACAP1Q15027 740 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 SF3A1Q15459 793 aaKnown RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 TDRD10Q5VZ19 366 aaKnown RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 LARP1BQ659C4 914 aaKnown RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 C12orf40Q86WS4 652 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 BRSK2Q8IWQ3 736 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 OR2I1PQ8NGU4 316 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 FUBP3Q96I24 572 aaKnown RBP eCLIP13.92□□□□□ -0.18
COPB1-209ENST00000533096 CBWD1Q9BRT8 395 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 CHORDC1Q9UHD1 332 aaPredicted RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 EVLQ9UI08 416 aaPredicted RBP13.92□□□□□ -0.18
COPB1-209ENST00000533096 SIX4Q9UIU6 781 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 CDH9Q9ULB4 789 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 CFAP47Q6ZTR5 3102 aa13.92□□□□□ -0.18
COPB1-209ENST00000533096 RALGAPA1Q6GYQ0 2036 aa13.91□□□□□ -0.18
COPB1-209ENST00000533096 F8VP50 259 aa13.91□□□□□ -0.18
COPB1-209ENST00000533096 ZBTB24O43167 697 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms