RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 ADGRF2Q8IZF7 708 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 CAMKK1Q8N5S9 505 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 ATAD1Q8NBU5 361 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 SPPL2BQ8TCT7 592 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 PLEKHO2Q8TD55 490 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 TMC2Q8TDI7 906 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 ERCC4Q92889 916 aaPredicted RBP10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 SMARCD2Q92925 531 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 CORO1BQ9BR76 489 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 CRISPLD1Q9H336 500 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 TRPV4Q9HBA0 871 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 CEP72Q9P209 647 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 YIPF1Q9Y548 306 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 SDK1Q7Z5N4 2213 aa10.89□□□□□ -0.67
CHMP4A-206ENST00000533011 LAMA5O15230 3695 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 GABRDO14764 452 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 KHNYNO15037 678 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 STAU1O95793 577 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 C4BPAP04003 597 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 FCARP24071 287 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 PCSK1P29120 753 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 ATICP31939 592 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 PSMC2P35998 433 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 TUFMP49411 452 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 EPHB3P54753 998 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 DLG4P78352 724 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 C19orf57Q0VDD7 668 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 BIRC3Q13489 604 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 GRM2Q14416 872 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 NFE2Q16621 373 aaPredicted RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 WDR72Q3MJ13 1102 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 FAM78AQ5JUQ0 283 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 CYP4A22Q5TCH4 519 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 INTS8Q75QN2 995 aaKnown RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 LIMS2Q7Z4I7 341 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 C11orf74Q86VG3 221 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 LRRTM3Q86VH5 581 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 LEMD2Q8NC56 503 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 ING5Q8WYH8 240 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 SYAP1Q96A49 352 aaPredicted RBP10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 DOCK6Q96HP0 2047 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 ASB16Q96NS5 453 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 MMS19Q96T76 1030 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 CACNA2D2Q9NY47 1150 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 ASB3Q9Y575 518 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 PCDHB5Q9Y5E4 795 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 SPAG17Q6Q759 2223 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
CHMP4A-206ENST00000533011 BPTFQ12830 3046 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 AKAP13Q12802 2813 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 CETN3O15182 167 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 CHADO15335 359 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 TACC1O75410 805 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 ZIC2O95409 532 aaPredicted RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 KRT13P13646 458 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 ACAT1P24752 427 aaKnown RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 PPP1R2P41236 205 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 VAMP7P51809 220 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 KPNA1P52294 538 aaPredicted RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 EPHA5P54756 1037 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 MYL6P60660 151 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 TNNC1P63316 161 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 ENPEPQ07075 957 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 STIM1Q13586 685 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 NCOA4Q13772 614 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 SLC5A9Q2M3M2 681 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 MGAT5BQ3V5L5 792 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 PLK5Q496M5 336 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 PRSS36Q5K4E3 855 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 TDRD10Q5VZ19 366 aaKnown RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 PDZD4Q76G19 769 aaPredicted RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 ITIH5Q86UX2 942 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 OSTM1Q86WC4 334 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 YAF2Q8IY57 180 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 FAM186BQ8IYM0 893 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 KBTBD7Q8WVZ9 684 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 SEPT5Q99719 369 aaPredicted RBP10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 TSG101Q99816 390 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 MKNK1Q9BUB5 465 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 XYLT2Q9H1B5 865 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 VRTNQ9H8Y1 702 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 ASAH2Q9NR71 780 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 MAN1B1Q9UKM7 699 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 GTF3C4Q9UKN8 822 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 SLC8A2Q9UPR5 921 aa10.87□□□□□ -0.67
CHMP4A-206ENST00000533011 NOTCH4Q99466 2003 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 BCLAF3A2AJT9 711 aaKnown RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 MYBPHLA2RUH7 354 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 TK2O00142 265 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 VNN1O95497 513 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 TOP3BO95985 862 aaKnown RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 CAPNS1P04632 268 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 HAPLN1P10915 354 aaPredicted RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 MYL4P12829 197 aa10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 WARSP23381 471 aaKnown RBP10.86□□□□□ -0.67
CHMP4A-206ENST00000533011 LMO2P25791 158 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms