RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ING5Q8WYH8 240 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 SHC3Q92529 594 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 ZSWIM1Q9BR11 485 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 NAA15Q9BXJ9 866 aaKnown RBP26.3■■□□□ 1.8
USP48-214ENST00000532737 GANQ9H2C0 597 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 IL21Q9HBE4 155 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 CSNK1G1Q9HCP0 422 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 KIAA1257Q9ULG3 409 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 MAGED2Q9UNF1 606 aaPredicted RBP26.3■■□□□ 1.8
USP48-214ENST00000532737 HCN4Q9Y3Q4 1203 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 FHOD1Q9Y613 1164 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 PTPRDP23468 1912 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 ZNF197O14709 1029 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 UCHL3P15374 230 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 CEBPBP17676 345 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 GBP2P32456 591 aaPredicted RBP26.29■■□□□ 1.8
USP48-214ENST00000532737 SSTR3P32745 418 aaPredicted RBP26.29■■□□□ 1.8
USP48-214ENST00000532737 MAP3K7CLP57077 242 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 SGO2Q562F6 1265 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 POTEHQ6S545 545 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 GAREM2Q75VX8 874 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 TDRD5Q8NAT2 981 aaKnown RBP26.29■■□□□ 1.8
USP48-214ENST00000532737 SHKBP1Q8TBC3 707 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 FGF13Q92913 245 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 CEP295NLQ96MC4 621 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 ERGIC2Q96RQ1 377 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 FAM207AQ9NSI2 230 aaPredicted RBP26.29■■□□□ 1.8
USP48-214ENST00000532737 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.29■■□□□ 1.8
USP48-214ENST00000532737 NR2E1Q9Y466 385 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 DENND4AQ7Z401 1863 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 MUC6Q6W4X9 2439 aa26.29■■□□□ 1.8
USP48-214ENST00000532737 FOXN3O00409 490 aaPredicted RBP26.28■■□□□ 1.8
USP48-214ENST00000532737 EPHB6O15197 1021 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 SERPINC1P01008 464 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 USP8P40818 1118 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 USP46P62068 366 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 FANCCQ00597 558 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 CLEC20AQ6ZU45 233 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 NPAS3Q8IXF0 933 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 RNF214Q8ND24 703 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 MYRFLQ96LU7 910 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 DUSP16Q9BY84 665 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 CDH7Q9ULB5 785 aa26.28■■□□□ 1.8
USP48-214ENST00000532737 A0A1B0GTH6 734 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 A0A1W2PRU2 124 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 O00370 1275 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 MICAL2O94851 1124 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 NPR3P17342 541 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 BRD2P25440 801 aaKnown RBP26.27■■□□□ 1.8
USP48-214ENST00000532737 GABRR2P28476 465 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 RAPGEF1Q13905 1077 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 DRAP1Q14919 205 aaPredicted RBP26.27■■□□□ 1.8
USP48-214ENST00000532737 PTPN21Q16825 1174 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 GOLGA7BQ2TAP0 167 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 FILIP1LQ4L180 1135 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 DENND5BQ6ZUT9 1274 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 TMEM150AQ86TG1 271 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 ACSF2Q96CM8 615 aaPredicted RBP26.27■■□□□ 1.8
USP48-214ENST00000532737 TRMT2BQ96GJ1 504 aaKnown RBP26.27■■□□□ 1.8
USP48-214ENST00000532737 PCMTD1Q96MG8 357 aaPredicted RBP26.27■■□□□ 1.8
USP48-214ENST00000532737 GPR88Q9GZN0 384 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 ACP6Q9NPH0 428 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 TSPAN16Q9UKR8 245 aa26.27■■□□□ 1.8
USP48-214ENST00000532737 TNFRSF10BO14763 440 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 F11P03951 625 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 PNMA6AP0CW24 399 aaPredicted RBP26.26■■□□□ 1.79
USP48-214ENST00000532737 LAMP2P13473 410 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 TEAD2Q15562 447 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 TTC30AQ86WT1 665 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 NUP93Q8N1F7 819 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 ANKRD52Q8NB46 1076 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 MCRS1Q96EZ8 462 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 ATXN3LQ9H3M9 355 aa26.26■■□□□ 1.79
USP48-214ENST00000532737 TRIOO75962 3097 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 HHLA1C9JL84 531 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 FGF19O95750 216 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 RFX1P22670 979 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 POLR2FP61218 127 aaKnown RBP26.25■■□□□ 1.79
USP48-214ENST00000532737 NR1I3Q14994 352 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 CNGA2Q16280 664 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 LCLAT1Q6UWP7 414 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 FAM71AQ8IYT1 594 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 ZDHHC14Q8IZN3 488 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 SCAMP5Q8TAC9 235 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 TTLL2Q9BWV7 592 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 STK33Q9BYT3 514 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 EPS15L1Q9UBC2 864 aa26.25■■□□□ 1.79
USP48-214ENST00000532737 CYP26A1O43174 497 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 CDC25CP30307 473 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 SMYD5Q6GMV2 418 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 GPRIN1Q7Z2K8 1008 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 PLCD3Q8N3E9 789 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 NEK11Q8NG66 645 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 UBA3Q8TBC4 463 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 UXTQ9UBK9 157 aaPredicted RBP26.24■■□□□ 1.79
USP48-214ENST00000532737 LIMD1Q9UGP4 676 aa26.24■■□□□ 1.79
USP48-214ENST00000532737 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.24■■□□□ 1.79
USP48-214ENST00000532737 PRR33A8MZF0 331 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 TADA3O75528 432 aa26.23■■□□□ 1.79
USP48-214ENST00000532737 ALADP13716 330 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms