RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 JAM2P57087 298 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CYP26C1Q6V0L0 522 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CACNA2D4Q7Z3S7 1137 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ATXN2LQ8WWM7 1075 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ZNF606Q8WXB4 792 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TCEAL4Q96EI5 215 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 C8orf48Q96LL4 319 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ASB2Q96Q27 587 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 DUSP16Q9BY84 665 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CSNK1G1Q9HCP0 422 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 WDR6Q9NNW5 1121 aaKnown RBP12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ASB3Q9Y575 518 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ESPNB1AK53 854 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TULP2O00295 520 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MICAL2O94851 1124 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 NPR3P17342 541 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CCR2P41597 374 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 USP46P62068 366 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PTK2Q05397 1052 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SMAD2Q15796 467 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CNGA2Q16280 664 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SLC5A9Q2M3M2 681 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 LCLAT1Q6UWP7 414 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 DENND5BQ6ZUT9 1274 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ITIH5Q86UX2 942 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SCAMP5Q8TAC9 235 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ITFG1Q8TB96 612 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SPATA17Q96L03 361 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 LRRC3Q9BY71 257 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ASAH2Q9NR71 780 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 HESX1Q9UBX0 185 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GREB1Q4ZG55 1949 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CLUHO75153 1309 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CBFA2T2O43439 604 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TPM3P06753 285 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 POU2F2P09086 479 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CSH1P0DML2 217 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CSH2P0DML3 217 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SOX5P35711 763 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ARID5AQ03989 594 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PDE4CQ08493 712 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PUS10Q3MIT2 529 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CYP4A22Q5TCH4 519 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PDZD4Q76G19 769 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GPRIN1Q7Z2K8 1008 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TMC8Q8IU68 726 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CPLX3Q8WVH0 158 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ING5Q8WYH8 240 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 NECTIN4Q96NY8 510 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TRIM5Q9C035 493 aa12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
TRAF3IP2-212ENST00000532708 A0A1W2PRU2 124 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 HHLA1C9JL84 531 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 M0QYV0 167 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TNFRSF10BO14763 440 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 BMP1P13497 986 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 FSHRP23945 695 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GABRR2P28476 465 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 STAT1P42224 750 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SLC5A3P53794 718 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GAREM2Q75VX8 874 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 NUP93Q8N1F7 819 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 BAP1Q92560 729 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 RPGRIP1Q96KN7 1286 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TTYH3Q9C0H2 523 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ZNF638Q14966 1978 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 FAM170AA1A519 330 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MED7O43513 233 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CYP11B1P15538 503 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 BCAT1P54687 386 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 EPHA5P54756 1037 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PKDCCQ504Y2 493 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PRSS36Q5K4E3 855 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SARM1Q6SZW1 724 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PIGZQ86VD9 579 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SECISBP2LQ93073 1101 aaKnown RBP12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 FAM50BQ9Y247 325 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 DAAM1Q9Y4D1 1078 aa12.6□□□□□ -0.39
TRAF3IP2-212ENST00000532708 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PIK3R2O00459 728 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MOSPD3O75425 235 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CEBPBP17676 345 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 KRT9P35527 623 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 RGS7P49802 495 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SLC8A3P57103 927 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 BPIFB4P59827 614 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 BST2Q10589 180 aaKnown RBP12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 STILQ15468 1287 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 POTEHQ6S545 545 aa12.59□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TMEM150AQ86TG1 271 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms