RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CUL3Q13618 768 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 ACVR2BQ13705 512 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 CERS5Q8N5B7 392 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 CCDC90BQ9GZT6 254 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 TMEM39AQ9NV64 488 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 C3P01024 1663 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 ASS1P00966 412 aaKnown RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 FDFT1P37268 417 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 LHX1P48742 406 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 SGSM3Q96HU1 749 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 ABHD8Q96I13 439 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 FRMD8P1Q9BZ68 369 aaPredicted RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 ALG6Q9Y672 507 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 C2orf81A6NN90 581 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 SUPT3HB4E1H0 165 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 H0Y3Z8 333 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 EPHB3P54753 998 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 ENGASEQ8NFI3 743 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 COPS5Q92905 334 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 PRMT1Q99873 361 aaKnown RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 SNRPAP09012 282 aaKnown RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 HPCAP84074 193 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 RARS2Q5T160 578 aaKnown RBP15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 PCYOX1LQ8NBM8 494 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 GGT7Q9UJ14 662 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 TRIM65Q6PJ69 517 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 OR2W6PQ8NHA6 318 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 SLC25A13Q9UJS0 675 aa15.35■□□□□ 0.05
PCDHA9-202ENST00000532602 VSNL1P62760 191 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 ZNF720Q7Z2F6 126 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 CATSPER1Q8NEC5 780 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 PGLYRP2Q96PD5 576 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 PFDN1O60925 122 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 KPNA1P52294 538 aaPredicted RBP15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 CYP24A1Q07973 514 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 TIGD7Q6NT04 549 aaPredicted RBP15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 MRNIPQ6NTE8 343 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 TFB1MQ8WVM0 346 aaKnown RBP15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 CGRRF1Q99675 332 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 PACSIN1Q9BY11 444 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 RHOBTB1O94844 696 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 AVPR1AP37288 418 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 BCAT1P54687 386 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 C4orf19Q8IY42 314 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 VGLL2Q8N8G2 317 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 CYFIP2Q96F07 1278 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 ZNF518BQ9C0D4 1074 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 GPRC5DQ9NZD1 345 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 EFEMP1Q12805 493 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 DENND5BQ6ZUT9 1274 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 ITIH5Q86UX2 942 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 IRF6O14896 467 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 SOAT2O75908 522 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 VCLP18206 1134 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 NLRP14Q86W24 1093 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 PCMTD2Q9NV79 361 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 NMRK1Q9NWW6 199 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 CNTNAP2Q9UHC6 1331 aa15.34■□□□□ 0.05
PCDHA9-202ENST00000532602 RAD51CO43502 376 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 FAM107AO95990 144 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 HDAC4P56524 1084 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 HIC1Q14526 733 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 SOCS4Q8WXH5 440 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 ERGIC2Q96RQ1 377 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 MRPL1Q9BYD6 325 aaKnown RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 PDGFDQ9GZP0 370 aaPredicted RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 RANBP17Q9H2T7 1088 aaKnown RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 TMEM161AQ9NX61 479 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 GRID1Q9ULK0 1009 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 LZTS3O60299 673 aaPredicted RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 H2AFYO75367 372 aaKnown RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 PMS1P54277 932 aaKnown RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 TMC7Q7Z402 723 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 DDX42Q86XP3 938 aaKnown RBP eCLIP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 TAS1R2Q8TE23 839 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 ZNF669Q96BR6 464 aaPredicted RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 CDK5RAP1Q96SZ6 601 aaKnown RBP15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 SPACA6W5XKT8 324 aa15.33■□□□□ 0.05
PCDHA9-202ENST00000532602 UBR1Q8IWV7 1749 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 GOLGA8TH3BQL2 631 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 PPATQ06203 517 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 CCNJLQ8IV13 435 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 CYP3A43Q9HB55 503 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 CFAP73A6NFT4 308 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 PMPCBO75439 489 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 PTK7Q13308 1070 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 LRIG3Q6UXM1 1119 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 PPIL6Q8IXY8 311 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 C4orf33Q8N1A6 199 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 SLC20A1Q8WUM9 679 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 TATDN2Q93075 761 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 AAR2Q9Y312 384 aaKnown RBP15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 KRT87PA6NCN2 255 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 HNRNPRO43390 633 aaKnown RBP15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 SLITRK3O94933 977 aa15.33■□□□□ 0.04
PCDHA9-202ENST00000532602 LRRC74AQ0VAA2 488 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms