RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 AKT1P31749 480 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 SP2Q02086 613 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 ARHGAP42A6NI28 874 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 GCNT1Q02742 428 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 E4F1Q66K89 784 aaPredicted RBP16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 RNF135Q8IUD6 432 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 ATP11CQ8NB49 1132 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 DCUN1D1Q96GG9 259 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 EIF2AQ9BY44 585 aaKnown RBP16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 NIFKQ9BYG3 293 aaKnown RBP16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 NT5DC1Q5TFE4 455 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 ANKMY2Q8IV38 441 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 GPR152Q8TDT2 470 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 PBXIP1Q96AQ6 731 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 CBX4O00257 560 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 ADH1AP07327 375 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 FGFR1P11362 822 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 PPM1AP35813 382 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 ANKS3Q6ZW76 656 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 TFAP2DQ7Z6R9 452 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 CACUL1Q86Y37 369 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 SNX12Q9UMY4 172 aa16.4■□□□□ 0.22
PPFIA1-222ENST00000532504 PMPCBO75439 489 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 KRT37O76014 449 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 OR1D2P34982 312 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 KCNJ1P48048 391 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 TBX4P57082 545 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 RTP1P59025 263 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 ZKSCAN8Q15776 578 aaPredicted RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 ULBP1Q9BZM6 244 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 IQANK1A0A1B0GTG1 560 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 GOLGA8KD6RF30 607 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 RHOCP08134 193 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 YWHAZP63104 245 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 BYSLQ13895 437 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 DCLRE1AQ6PJP8 1040 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 RBM43Q6ZSC3 357 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 WHAMMQ8TF30 809 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 SNF8Q96H20 258 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 THG1LQ9NWX6 298 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 MRPS23Q9Y3D9 190 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 LSM8O95777 96 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 NCAPHQ15003 741 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 CLEC16AQ2KHT3 1053 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 TTC23LQ6PF05 361 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 RASSF3Q86WH2 238 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 CABS1Q96KC9 395 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 INTS9Q9NV88 658 aaKnown RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 AP4E1Q9UPM8 1137 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 DOLKQ9UPQ8 538 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 EFCAB14O75071 495 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 CCDC149Q6ZUS6 474 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 GPATCH11Q8N954 259 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 FAM71DQ8N9W8 422 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 ZNF784Q8NCA9 323 aaPredicted RBP16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 SH3KBP1Q96B97 665 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 DUSP10Q9Y6W6 482 aa16.39■□□□□ 0.21
PPFIA1-222ENST00000532504 KDM3BQ7LBC6 1761 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ARVCFO00192 962 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 GNGT1P63211 74 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 TUSC3Q13454 348 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 P3H1Q32P28 736 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 TMEM63BQ5T3F8 832 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 HERC6Q8IVU3 1022 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 CNPY3Q9BT09 278 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 FGFBP2Q9BYJ0 223 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 DHX33Q9H6R0 707 aaKnown RBP16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 OSGEPQ9NPF4 335 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 SPG21Q9NZD8 308 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 PLA2G4CQ9UP65 541 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 RGPD1P0DJD0 1748 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 LGR5O75473 907 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ZNF467Q7Z7K2 595 aaPredicted RBP16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 GPR63Q9BZJ6 419 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 BTAF1O14981 1849 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 SMIM28A0A1B0GU29 152 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 GRID2IPA4D2P6 1211 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 CCR1P32246 355 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ASPHQ12797 758 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 PTK7Q13308 1070 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ARNTL2Q8WYA1 636 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ARHGEF26Q96DR7 871 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 TRIM51Q9BSJ1 452 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ABCB6Q9NP58 842 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 E5RJQ4 531 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 GJB6O95452 261 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 OXCT1P55809 520 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 ZNF792Q3KQV3 632 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 TPGS1Q6ZTW0 290 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 DEFB106AQ8N104 65 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 SPATA4Q8NEY3 305 aa16.38■□□□□ 0.21
PPFIA1-222ENST00000532504 PPHLN1Q8NEY8 458 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms