RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 FAM50BQ9Y247 325 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 LOC102724159A0A0B4J2E5 919 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ESYT3A0FGR9 886 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 RHOAP61586 193 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 APBA1Q02410 837 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 FUT2Q10981 343 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PWP2Q15269 919 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PABPC1LQ4VXU2 614 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 SZRD1Q7Z422 152 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 RXFP2Q8WXD0 754 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ULK4Q96C45 1275 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 TEPSINQ96N21 525 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 VAV3Q9UKW4 847 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PCDHA2Q9Y5H9 948 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 A0A1W2PQJ5 194 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ANO9A1A5B4 782 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 CFAP69A5D8W1 941 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 TBC1D3BA6NDS4 549 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PARNO95453 639 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 OAS2P29728 719 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 CCR1P32246 355 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 GTF2BQ00403 316 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 PTK7Q13308 1070 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 IL17AQ16552 155 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ECM1Q16610 540 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ADCK2Q7Z695 626 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ARHGEF2Q92974 986 aaKnown RBP8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 YIPF2Q9BWQ6 316 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 TRIM54Q9BYV2 358 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 OSBPL8Q9BZF1 889 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ALG6Q9Y672 507 aa8.3□□□□□ -1.08
CTNND1-230ENST00000532245 ICAM3P32942 547 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CCDC85BQ15834 202 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 RAB42Q8N4Z0 105 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF606Q8WXB4 792 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TTPALQ9BTX7 342 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF112Q9UJU3 913 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TFR2Q9UP52 801 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 F8VZ95 297 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CHEK2O96017 543 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 HSPA1AP0DMV8 641 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 HSPA1BP0DMV9 641 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 HDCP19113 662 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 RRM1P23921 792 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 GLUD2P49448 558 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 STX1BP61266 288 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 IL9RQ01113 521 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 GRB14Q14449 540 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 P3H1Q32P28 736 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ZRANB3Q5FWF4 1079 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 DENND5BQ6ZUT9 1274 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 MS4A14Q96JA4 679 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TRAV19A0A0A6YYK7 116 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 KRT38O76015 456 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 SEC31AO94979 1220 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 SERPIND1P05546 499 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ADRB2P07550 413 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ZKSCAN8Q15776 578 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 OLFML2BQ68BL8 750 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TSHZ1Q6ZSZ6 1077 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 GET4Q7L5D6 327 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 LGI2Q8N0V4 545 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ATL2Q8NHH9 583 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 STMN2Q93045 179 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ARHGEF26Q96DR7 871 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TMA16Q96EY4 203 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 SNF8Q96H20 258 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 SCUBE2Q9NQ36 999 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 AMACRQ9UHK6 382 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 AP4E1Q9UPM8 1137 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 COL1A1P02452 1464 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 GOLGA8KD6RF30 607 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 WNT7AO00755 349 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 FOXP2O15409 715 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 NDUFS3O75489 264 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ATXN3P54252 364 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CUL1Q13616 776 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 PKN2Q16513 984 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 DDR2Q16832 855 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TRIM60Q495X7 471 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 C18orf25Q96B23 403 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CABS1Q96KC9 395 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 IRX2Q9BZI1 471 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ULBP1Q9BZM6 244 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 ZNF518BQ9C0D4 1074 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 PKP3Q9Y446 797 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CRYBG1Q9Y4K1 1723 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 USP27XA6NNY8 438 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 RBP3P10745 1247 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 RALBP11234 206 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 RPL9P32969 192 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 GRM5P41594 1212 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 CSE1LP55060 971 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 YWHAZP63104 245 aaKnown RBP8.29□□□□□ -1.08
CTNND1-230ENST00000532245 TUSC3Q13454 348 aa8.29□□□□□ -1.08
CTNND1-230ENST00000532245 FNDC3BQ53EP0 1204 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms