RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 A0A1W2PQH9 124 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 ANO9A1A5B4 782 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM221AA4D161 298 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZNF233A6NK53 670 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 I3L4J1 428 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 GPR39O43194 453 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 TGFB1I1O43294 461 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 KINO60870 393 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 XYLBO75191 536 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 RHOBTB3O94955 611 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 KIF20AO95235 890 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 SMC2O95347 1197 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 EPCAMP16422 314 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 HOXB8P17481 243 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 RPL17P18621 184 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 FGFR3P22607 806 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 IGFBP6P24592 240 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CCNFP41002 786 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 BRCC3P46736 316 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CYP2J2P51589 502 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLCN4P51793 760 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 TFAMQ00059 246 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 SMAD4Q13485 552 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 SNW1Q13573 536 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 KCNC3Q14003 757 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CBX2Q14781 532 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 DHCR24Q15392 516 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 RTP2Q5QGT7 225 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 SPATA1Q5VX52 437 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 ELMSAN1Q6PJG2 1045 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 PRSS55Q6UWB4 352 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CD300LGQ6UXG3 332 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 PALB2Q86YC2 1186 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CBWD2Q8IUF1 395 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 BRSK2Q8IWQ3 736 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 SMRP1Q8NCR6 262 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 KIAA0895Q8NCT3 520 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 ENGASEQ8NFI3 743 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 PJA1Q8NG27 643 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 FBXO27Q8NI29 283 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 LNX1Q8TBB1 728 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CACTINQ8WUQ7 758 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 RNF166Q96A37 237 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 HSH2DQ96JZ2 352 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 MSLNLQ96KJ4 702 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 FBXL18Q96ME1 805 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 TIGD1Q96MW7 591 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 NECAB3Q96P71 396 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 CDC6Q99741 560 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 YIPF4Q9BSR8 244 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 SARGQ9BW04 601 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 KLF16Q9BXK1 252 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 KIAA1586Q9HCI6 787 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 LUC7LQ9NQ29 371 aaKnown RBP6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 DZANK1Q9NVP4 752 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 RMND1Q9NWS8 449 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 OBP2AQ9NY56 170 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 FNIP2Q9P278 1114 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 DPP7Q9UHL4 492 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 DACH1Q9UI36 760 aa6.22□□□□□ -1.41
HMGB1P42-201ENST00000532126 H7C4K7 107 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DLL1O00548 723 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PIRO00625 290 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PDXKO00764 312 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 ENC1O14682 589 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SYN3O14994 580 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CLIC2O15247 247 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 MBTPS2O43462 519 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 TGM5O43548 720 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 TIMM44O43615 452 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CALUO43852 315 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 EXOC3O60645 756 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CILPO75339 1184 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 GLUD1P00367 558 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 C1RP00736 705 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SPATA31D3P0C874 917 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 IL9P15248 144 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 TKTP29401 623 aaKnown RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 OR1D2P34982 312 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 RNF144AP50876 292 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 UBE2HP62256 183 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CLCQ05315 142 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 ITIH3Q06033 890 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PNOCQ13519 176 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 KCNB1Q14721 858 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SETDB1Q15047 1291 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SURF1Q15526 300 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SMAD2Q15796 467 aaKnown RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 PSMD5Q16401 504 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SNRNP35Q16560 246 aaKnown RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 MINDY4Q4G0A6 757 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 C9orf57Q5W0N0 161 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 MRM1Q6IN84 353 aaKnown RBP6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 CES5AQ6NT32 575 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SYCE2Q6PIF2 218 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 DSTYKQ6XUX3 929 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 SPATA31D4Q6ZUB0 917 aa6.21□□□□□ -1.42
HMGB1P42-201ENST00000532126 BTLAQ7Z6A9 289 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms