RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 DPH1Q9BZG8 443 aa5.19□□□□□ -1.58
USP47-211ENST00000531513 SENP6Q9GZR1 1112 aaPredicted RBP5.19□□□□□ -1.58
USP47-211ENST00000531513 TMEM140Q9NV12 185 aa5.19□□□□□ -1.58
USP47-211ENST00000531513 SIDT1Q9NXL6 827 aaKnown RBP5.19□□□□□ -1.58
USP47-211ENST00000531513 RRN3Q9NYV6 651 aa5.19□□□□□ -1.58
USP47-211ENST00000531513 AJAP1Q9UKB5 411 aaPredicted RBP5.19□□□□□ -1.58
USP47-211ENST00000531513 TRIM43BA6NCK2 446 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 EPB41L2O43491 1005 aaKnown RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 TBC1D4O60343 1298 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 GPR32O75388 356 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 PRSS23O95084 383 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 GPANK1O95872 356 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 AHSGP02765 367 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 ANXA2P07355 339 aaKnown RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 RAP2AP10114 183 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 ATP5JP18859 108 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 HDCP19113 662 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SLC6A2P23975 617 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 PCSK1P29120 753 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 ABCG1P45844 678 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 ARL4CP56559 192 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SOX8P57073 446 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 PROK1P58294 105 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 RPS16P62249 146 aaKnown RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 DDX10Q13206 875 aaKnown RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 GRM1Q13255 1194 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 UBXN2BQ14CS0 331 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 CYP2A13Q16696 494 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SEM1Q6ZVN7 128 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SCARB1Q8WTV0 552 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 MUL1Q969V5 352 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SKA1Q96BD8 255 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 TRIM43Q96BQ3 446 aaPredicted RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 IQCDQ96DY2 449 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SNX22Q96L94 193 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 EIF2AK1Q9BQI3 630 aaKnown RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 HEPHQ9BQS7 1158 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 C1orf43Q9BWL3 253 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 MAGEH1Q9H213 219 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 UNKLQ9H9P5 680 aaKnown RBP5.18□□□□□ -1.58
USP47-211ENST00000531513 SMURF2Q9HAU4 748 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 OBP2BQ9NPH6 170 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 ITM2CQ9NQX7 267 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 ASB6Q9NWX5 421 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 KCTD5Q9NXV2 234 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SLC17A6Q9P2U8 582 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 GRHPRQ9UBQ7 328 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 GJD2Q9UKL4 321 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SLC39A10Q9ULF5 831 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 SCINQ9Y6U3 715 aa5.18□□□□□ -1.58
USP47-211ENST00000531513 POLR2AP24928 1970 aaKnown RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 A0A1B0GVC2 190 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 CGB1A6NKQ9 187 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 BTN3A1O00481 513 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 NPC1O15118 1278 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 THAP12O43422 761 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 POMCP01189 267 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 MT-ND5P03915 603 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 PYGLP06737 847 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 FAM163BP0C2L3 166 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 VEGFAP15692 232 aaPredicted RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 CASP2P42575 452 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 PIK3CGP48736 1102 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 GEMIN4P57678 1058 aaKnown RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 FOXO1Q12778 655 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 PRKG1Q13976 671 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 ZNF783Q6ZMS7 281 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 ATG16L2Q8NAA4 619 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 MAML1Q92585 1016 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 TNPO1Q92973 898 aaKnown RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 C18orf8Q96DM3 657 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 PTCD3Q96EY7 689 aaKnown RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 UBXN10Q96LJ8 280 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 PPM1MQ96MI6 270 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 MYOCQ99972 504 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 EIF2AQ9BY44 585 aaKnown RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
USP47-211ENST00000531513 IL17RBQ9NRM6 502 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 TM7SF3Q9NS93 570 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 FBXO34Q9NWN3 711 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 PDP2Q9P2J9 529 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 ZDHHC8Q9ULC8 765 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 MED16Q9Y2X0 877 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
USP47-211ENST00000531513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.17□□□□□ -1.58
USP47-211ENST00000531513 LGALS16A8MUM7 142 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 AREL1O15033 823 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 NCAM2O15394 837 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 TEX33O43247 280 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 PROP1O75360 226 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 ZFPL1O95159 310 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 CD1AP06126 327 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 SERPINF1P36955 418 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 KCNJ5P48544 419 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 VAV2P52735 878 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 ITGA8P53708 1063 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 EXOSC9Q06265 439 aaKnown RBP5.16□□□□□ -1.58
USP47-211ENST00000531513 SLC13A2Q13183 592 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 POSTNQ15063 836 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 ZNF529Q6P280 563 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms