RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 HMGB4Q8WW32 186 aa21.26■□□□□ 0.99
HIPK3-205ENST00000531504 PNMA5Q96PV4 448 aa21.26■□□□□ 0.99
HIPK3-205ENST00000531504 PNKPQ96T60 521 aa21.26■□□□□ 0.99
HIPK3-205ENST00000531504 REEP2Q9BRK0 252 aa21.26■□□□□ 0.99
HIPK3-205ENST00000531504 PARVGQ9HBI0 331 aa21.26■□□□□ 0.99
HIPK3-205ENST00000531504 DDX43Q9NXZ2 648 aaKnown RBP21.26■□□□□ 0.99
HIPK3-205ENST00000531504 SGK1O00141 431 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 HUS1O60921 280 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 CAPNS1P04632 268 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 APODP05090 189 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 TIE1P35590 1138 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 EIF2DP41214 584 aaKnown RBP21.25■□□□□ 0.99
HIPK3-205ENST00000531504 HMGN5P82970 282 aaKnown RBP21.25■□□□□ 0.99
HIPK3-205ENST00000531504 SCAPQ12770 1279 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 CFAP221Q4G0U5 840 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 SLFN12LQ6IEE8 588 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 SLC39A4Q6P5W5 647 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 IGSF10Q6WRI0 2623 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 SPATA2LQ8IUW3 424 aaPredicted RBP21.25■□□□□ 0.99
HIPK3-205ENST00000531504 TMEM86AQ8N2M4 240 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 PDCL2Q8N4E4 241 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 MINDY1Q8N5J2 469 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 FUBP3Q96I24 572 aaKnown RBP eCLIP21.25■□□□□ 0.99
HIPK3-205ENST00000531504 PLIN2Q99541 437 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 LIMCH1Q9UPQ0 1083 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 PCDH15Q96QU1 1955 aa21.25■□□□□ 0.99
HIPK3-205ENST00000531504 TCRBV21S2A2A0A5A6 115 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 SLC9A3R1O14745 358 aaPredicted RBP21.24■□□□□ 0.99
HIPK3-205ENST00000531504 KAT7O95251 611 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 CYP17A1P05093 508 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 SYPP08247 313 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 RPL6Q02878 288 aaKnown RBP21.24■□□□□ 0.99
HIPK3-205ENST00000531504 BECN1Q14457 450 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 GAB4Q2WGN9 574 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 ARSHQ5FYA8 562 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 SLC36A4Q6YBV0 504 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 CCDC83Q8IWF9 413 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 SCN4BQ8IWT1 228 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 FRMD1Q8N878 549 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 ZSCAN31Q96LW9 406 aaPredicted RBP21.24■□□□□ 0.99
HIPK3-205ENST00000531504 CCDC86Q9H6F5 360 aaKnown RBP21.24■□□□□ 0.99
HIPK3-205ENST00000531504 CAPN10Q9HC96 672 aa21.24■□□□□ 0.99
HIPK3-205ENST00000531504 AGO2Q9UKV8 859 aaKnown RBP21.24■□□□□ 0.99
HIPK3-205ENST00000531504 K7ELQ4 463 aaPredicted RBP21.23■□□□□ 0.99
HIPK3-205ENST00000531504 LEFTY2O00292 366 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 TRAK2O60296 914 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 IL18RAPO95256 599 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 FAM193AP78312 1265 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 RESTQ13127 1097 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 COL28A1Q2UY09 1125 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 FILIP1Q7Z7B0 1213 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 COL26A1Q96A83 441 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 GTF3C4Q9UKN8 822 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 L1RE1Q9UN81 338 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 PCDHB9Q9Y5E1 797 aa21.23■□□□□ 0.99
HIPK3-205ENST00000531504 SETXQ7Z333 2677 aaKnown RBP21.23■□□□□ 0.99
HIPK3-205ENST00000531504 ANTXRLA6NF34 631 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 EIF4E1BA6NMX2 242 aaKnown RBP21.22■□□□□ 0.99
HIPK3-205ENST00000531504 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.22■□□□□ 0.99
HIPK3-205ENST00000531504 ARHGAP33O14559 1287 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 ADH1CP00326 375 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 ACAT1P24752 427 aaKnown RBP21.22■□□□□ 0.99
HIPK3-205ENST00000531504 PCSK1P29120 753 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 MAGEA11P43364 429 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 ZNF131P52739 623 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 SLC14A1Q13336 389 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 TMEM119Q4V9L6 283 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 GPBP1Q86WP2 473 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 LRRC15Q8TF66 581 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 ADAMTS14Q8WXS8 1223 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 PKMYT1Q99640 499 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 FSCN3Q9NQT6 498 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.22■□□□□ 0.99
HIPK3-205ENST00000531504 DNAAF2Q9NVR5 837 aaKnown RBP21.22■□□□□ 0.99
HIPK3-205ENST00000531504 EHD2Q9NZN4 543 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 TRPM5Q9NZQ8 1165 aa21.22■□□□□ 0.99
HIPK3-205ENST00000531504 TBCAO75347 108 aaKnown RBP21.21■□□□□ 0.99
HIPK3-205ENST00000531504 KRT18P05783 430 aaKnown RBP21.21■□□□□ 0.99
HIPK3-205ENST00000531504 CD59P13987 128 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 GRIA2P42262 883 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 TNFRSF4P43489 277 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 KIR2DL1P43626 348 aaPredicted RBP21.21■□□□□ 0.99
HIPK3-205ENST00000531504 LHX1P48742 406 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 GTF2BQ00403 316 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 DHCR24Q15392 516 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 TRIP6Q15654 476 aaKnown RBP21.21■□□□□ 0.99
HIPK3-205ENST00000531504 C4orf50Q6ZRC1 276 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 TRMT11Q7Z4G4 463 aaKnown RBP21.21■□□□□ 0.99
HIPK3-205ENST00000531504 CEP295NLQ96MC4 621 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 ZHX3Q9H4I2 956 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 ARHGEF4Q9NR80 690 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 LAMA5O15230 3695 aa21.21■□□□□ 0.99
HIPK3-205ENST00000531504 ANKRD63C9JTQ0 380 aa21.2■□□□□ 0.98
HIPK3-205ENST00000531504 POLR2BP30876 1174 aaKnown RBP21.2■□□□□ 0.98
HIPK3-205ENST00000531504 SLC7A9P82251 487 aa21.2■□□□□ 0.98
HIPK3-205ENST00000531504 ATP2C1P98194 919 aaPredicted RBP21.2■□□□□ 0.98
HIPK3-205ENST00000531504 ZNF33AQ06730 810 aa21.2■□□□□ 0.98
HIPK3-205ENST00000531504 ADGRG2Q8IZP9 1017 aa21.2■□□□□ 0.98
HIPK3-205ENST00000531504 TMX3Q96JJ7 454 aa21.2■□□□□ 0.98
HIPK3-205ENST00000531504 SPATA17Q96L03 361 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms