RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
PTPRK-219ENST00000531050 TDRD1Q9BXT4 1180 aaKnown RBP8.12□□□□□ -1.11
PTPRK-219ENST00000531050 C1orf21Q9H246 121 aa8.12□□□□□ -1.11
PTPRK-219ENST00000531050 HIPK3Q9H422 1215 aa8.12□□□□□ -1.11
PTPRK-219ENST00000531050 MARCH7Q9H992 704 aa8.12□□□□□ -1.11
PTPRK-219ENST00000531050 EPB41L4AQ9HCS5 686 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-219ENST00000531050 CCDC177Q9NQR7 707 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-219ENST00000531050 THAP1Q9NVV9 213 aa8.12□□□□□ -1.11
PTPRK-219ENST00000531050 DDX56Q9NY93 547 aaKnown RBP8.12□□□□□ -1.11
PTPRK-219ENST00000531050 ATRNO75882 1429 aa8.12□□□□□ -1.11
PTPRK-219ENST00000531050 FAM237BA0A1B0GVD1 139 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ZNF701M0R085 212 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CLASP2O75122 1294 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 GGPS1O95749 300 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 C8BP07358 591 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 IFNA8P32881 189 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ADD2P35612 726 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 BMPR1AP36894 532 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 THOP1P52888 689 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 KRT76Q01546 638 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 MOGQ16653 247 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CYP4A22Q5TCH4 519 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TDRPQ86YL5 185 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TICAM1Q8IUC6 712 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SLC15A4Q8N697 577 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TTC13Q8NBP0 860 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 BRSK1Q8TDC3 778 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 OSCP1Q8WVF1 389 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 HERC2P3Q9BVR0 1158 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 NUF2Q9BZD4 464 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TP63Q9H3D4 680 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SMYD3Q9H7B4 428 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 MANSC1Q9H8J5 431 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 VPS45Q9NRW7 570 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TBC1D14Q9P2M4 693 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 COG5Q9UP83 839 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ABCA3Q99758 1704 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ARHGAP42A6NI28 874 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ZSCAN5BA6NJL1 495 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CENPBD1B2RD01 187 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ABHD2P08910 425 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TMEM253P0C7T8 217 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 KRT15P19012 456 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 IL4RP24394 825 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 FOXO4P98177 505 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 KRT17Q04695 432 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ITGADQ13349 1161 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ALX1Q15699 326 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CCDC14Q49A88 953 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 PGM2L1Q6PCE3 622 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 KBTBD6Q86V97 674 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 HEATR4Q86WZ0 1026 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 GALNT13Q8IUC8 556 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 HIPK4Q8NE63 616 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SLC30A5Q8TAD4 765 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 ADAMTS16Q8TE57 1224 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CAPSLQ8WWF8 208 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TRUB1Q8WWH5 349 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SLCO2A1Q92959 643 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SNF8Q96H20 258 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 MROQ9BYG7 248 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 IMPG2Q9BZV3 1241 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 C12orf65Q9H3J6 166 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 C10orf88Q9H8K7 445 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 CNNM2Q9H8M5 875 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 AS3MTQ9HBK9 375 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 TYW1Q9NV66 732 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 SENP1Q9P0U3 644 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 AJAP1Q9UKB5 411 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
PTPRK-219ENST00000531050 RNF11Q9Y3C5 154 aa8.11□□□□□ -1.11
PTPRK-219ENST00000531050 EXOC1LA0A1B0GW35 172 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CFAP99D6REC4 459 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 KPNA4O00629 521 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 MYO1DO94832 1006 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 UFL1O94874 794 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 UCHL3P15374 230 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PRKCAP17252 672 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SLC9A1P19634 815 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 STAT2P52630 851 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SLC25A3Q00325 362 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 HSPA14Q0VDF9 509 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 LRRC41Q15345 812 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 AGAP7PQ5VUJ5 663 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CYP4V2Q6ZWL3 525 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ZFPM1Q8IX07 1006 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PROM2Q8N271 834 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PQLC1Q8N2U9 271 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 DCLK2Q8N568 766 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SNX29Q8TEQ0 813 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 FERMT1Q9BQL6 677 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms