RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GPR15P49685 360 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 EPHB3P54753 998 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 MAP3K7CLP57077 242 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 CDR2Q01850 454 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 DLX2Q07687 328 aaPredicted RBP17.9■□□□□ 0.46
SF3B2-211ENST00000531041 PDE4CQ08493 712 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 SYCE2Q6PIF2 218 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 CYP26C1Q6V0L0 522 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 GPIHBP1Q8IV16 184 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 UBA3Q8TBC4 463 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 SLC35F5Q8WV83 523 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 MSLNLQ96KJ4 702 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 PRKD2Q9BZL6 878 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 LHX5Q9H2C1 402 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 IMPACTQ9P2X3 320 aa17.9■□□□□ 0.46
SF3B2-211ENST00000531041 BZW2Q9Y6E2 419 aaKnown RBP17.9■□□□□ 0.46
SF3B2-211ENST00000531041 XPO1O14980 1071 aaKnown RBP17.89■□□□□ 0.46
SF3B2-211ENST00000531041 MMEP08473 750 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 CFHP08603 1231 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 CSH1P0DML2 217 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 CSH2P0DML3 217 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 CHRNB2P17787 502 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 SSTR3P32745 418 aaPredicted RBP17.89■□□□□ 0.46
SF3B2-211ENST00000531041 GPD2P43304 727 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 ADKP55263 362 aaKnown RBP17.89■□□□□ 0.46
SF3B2-211ENST00000531041 KLHL30Q0D2K2 578 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 VEPH1Q14D04 833 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 TSR1Q2NL82 804 aaKnown RBP17.89■□□□□ 0.46
SF3B2-211ENST00000531041 HGSNATQ68CP4 663 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 ELMOD1Q8N336 334 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 C12orf76Q8N812 135 aaPredicted RBP17.89■□□□□ 0.46
SF3B2-211ENST00000531041 SLC20A1Q8WUM9 679 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 SYT11Q9BT88 431 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 ABHD10Q9NUJ1 306 aa17.89■□□□□ 0.46
SF3B2-211ENST00000531041 EYSQ5T1H1 3165 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 HHLA1C9JL84 531 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 TNFRSF10BO14763 440 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 CCL16O15467 120 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 XYLBO75191 536 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 SERPING1P05155 500 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 CDH5P33151 784 aaPredicted RBP17.89■□□□□ 0.45
SF3B2-211ENST00000531041 PLA2G4AP47712 749 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 FMO1Q01740 532 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 TAF3Q5VWG9 929 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 DENND1BQ6P3S1 775 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 EP400NLQ6ZTU2 488 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 ITIH5Q86UX2 942 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 NUP93Q8N1F7 819 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 TC2NQ8N9U0 490 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 MAFAQ8NHW3 353 aaPredicted RBP17.89■□□□□ 0.45
SF3B2-211ENST00000531041 GIPC2Q8TF65 315 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 PPM1EQ8WY54 764 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 SECISBP2LQ93073 1101 aaKnown RBP17.89■□□□□ 0.45
SF3B2-211ENST00000531041 PSMG2Q969U7 264 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 ZNF707Q96C28 371 aaPredicted RBP17.89■□□□□ 0.45
SF3B2-211ENST00000531041 ZNF512Q96ME7 567 aaPredicted RBP17.89■□□□□ 0.45
SF3B2-211ENST00000531041 S1PR5Q9H228 398 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 HAUS4Q9H6D7 363 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 CEP83Q9Y592 693 aa17.89■□□□□ 0.45
SF3B2-211ENST00000531041 SLC38A8A6NNN8 435 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 TULP2O00295 520 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 ITIH3Q06033 890 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 GOLGA8FQ08AF8 430 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 GOLGA8DPQ0D2H9 430 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 SKIV2LQ15477 1246 aaKnown RBP17.88■□□□□ 0.45
SF3B2-211ENST00000531041 RARS2Q5T160 578 aaKnown RBP17.88■□□□□ 0.45
SF3B2-211ENST00000531041 WDR59Q6PJI9 974 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 TMC5Q6UXY8 1006 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 TRIM72Q6ZMU5 477 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 DENND5BQ6ZUT9 1274 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 DNAJB7Q7Z6W7 309 aaPredicted RBP17.88■□□□□ 0.45
SF3B2-211ENST00000531041 GPR149Q86SP6 731 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 PIGZQ86VD9 579 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 WDTC1Q8N5D0 677 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 GPR152Q8TDT2 470 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 STK32AQ8WU08 396 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 KCTD13Q8WZ19 329 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 AGPAT1Q99943 283 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 PDCL3Q9H2J4 239 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 UBE2ZQ9H832 354 aaPredicted RBP17.88■□□□□ 0.45
SF3B2-211ENST00000531041 IL37Q9NZH6 218 aa17.88■□□□□ 0.45
SF3B2-211ENST00000531041 RTN3O95197 1032 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 LSM8O95777 96 aaKnown RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 SKILP12757 684 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 HMGA1P17096 107 aaKnown RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 PTPN2P17706 415 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 RPL34P49207 117 aaKnown RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 RAB41Q5JT25 222 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 PMF1Q6P1K2 205 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 ZNF571Q7Z3V5 609 aaPredicted RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 PASD1Q8IV76 773 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 SPC24Q8NBT2 197 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 TMEM35BQ8NCS4 154 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 SMG7Q92540 1137 aaKnown RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 HLA-CQ95604 372 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 TRMT2BQ96GJ1 504 aaKnown RBP17.87■□□□□ 0.45
SF3B2-211ENST00000531041 HSFY1Q96LI6 401 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 MYRFLQ96LU7 910 aa17.87■□□□□ 0.45
SF3B2-211ENST00000531041 TTLL2Q9BWV7 592 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms