RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 GOLGB1Q14789 3259 aaKnown RBP8.65□□□□□ -1.02
CSDE1-213ENST00000530784 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 ZNF785A8K8V0 405 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 SUN1O94901 812 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 LMNAP02545 664 aaKnown RBP8.65□□□□□ -1.02
CSDE1-213ENST00000530784 MMP10P09238 476 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 ADRA1BP35368 520 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 PLEKHO1Q53GL0 409 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-213ENST00000530784 OLFML1Q6UWY5 402 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 GRAMD1CQ8IYS0 662 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 SCAMP4Q969E2 229 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 TMEM125Q96AQ2 219 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 AIFM2Q9BRQ8 373 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 KMT5AQ9NQR1 393 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 CFAP97Q9P2B7 532 aa8.65□□□□□ -1.02
CSDE1-213ENST00000530784 KDM6AO15550 1401 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 CCDC195A0A1B0GUA6 201 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 E2F8A0AVK6 867 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 HSPA5P11021 654 aaKnown RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 TYRP14679 529 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 BMP5P22003 454 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 MC2RQ01718 297 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 FPGSQ05932 587 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 ZNF267Q14586 743 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 CD300EQ496F6 205 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 ATAT1Q5SQI0 421 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 IFIT1BQ5T764 474 aaKnown RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 TAPT1Q6NXT6 567 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 ZNF530Q6P9A1 599 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 Q6ZNX1 250 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 SSH3Q8TE77 659 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 TNPO1Q92973 898 aaKnown RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 ZG16BQ96DA0 208 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 SYNPO2LQ9H987 977 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 PANK3Q9H999 370 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 RLIMQ9NVW2 624 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 FEZ2Q9UHY8 353 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 CICQ96RK0 1608 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-213ENST00000530784 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
CSDE1-213ENST00000530784 C10orf71Q711Q0 1435 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 ZNF831Q5JPB2 1677 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 MATN4O95460 622 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 ALDH2P05091 517 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 TYRP1P17643 537 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 GATA3P23771 443 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 ANXA11P50995 505 aaKnown RBP8.63□□□□□ -1.03
CSDE1-213ENST00000530784 EPHB1P54762 984 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 RPS7P62081 194 aaKnown RBP8.63□□□□□ -1.03
CSDE1-213ENST00000530784 POU6F2P78424 691 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-213ENST00000530784 PIGFQ07326 219 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 DYRK1AQ13627 763 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 KIF22Q14807 665 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 CCDC157Q569K6 752 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 MORC1Q86VD1 984 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 PPP1R3BQ86XI6 285 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 LNX2Q8N448 690 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 TRIB1Q96RU8 372 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 MRPL46Q9H2W6 279 aaKnown RBP8.63□□□□□ -1.03
CSDE1-213ENST00000530784 GPR35Q9HC97 309 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 PNPOQ9NVS9 261 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 PNMA8BQ9ULN7 279 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-213ENST00000530784 AGAP1Q9UPQ3 857 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 NEU2Q9Y3R4 380 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 PCDHA1Q9Y5I3 950 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 NR2E3Q9Y5X4 410 aa8.63□□□□□ -1.03
CSDE1-213ENST00000530784 AP1G1O43747 822 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 OFD1O75665 1012 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 LPOP22079 712 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-213ENST00000530784 RFC4P35249 363 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 MTHFSP49914 203 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 ZNF135P52742 658 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-213ENST00000530784 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
CSDE1-213ENST00000530784 TPH2Q8IWU9 490 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 RAVER1Q8IY67 606 aaKnown RBP8.62□□□□□ -1.03
CSDE1-213ENST00000530784 SMOQ99835 787 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 MRPS18AQ9NVS2 196 aaKnown RBP8.62□□□□□ -1.03
CSDE1-213ENST00000530784 KCTD5Q9NXV2 234 aa8.62□□□□□ -1.03
CSDE1-213ENST00000530784 COL5A3P25940 1745 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-213ENST00000530784 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 H3BUI4 141 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 POLRMTO00411 1230 aaKnown RBP8.61□□□□□ -1.03
CSDE1-213ENST00000530784 TOR1BO14657 336 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 AHSGP02765 367 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 RARBP10826 455 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 NKX6-1P78426 367 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-213ENST00000530784 HABP2Q14520 560 aaPredicted RBP8.61□□□□□ -1.03
CSDE1-213ENST00000530784 PLEKHG6Q3KR16 790 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 TMPRSS9Q7Z410 1059 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 ADGRG5Q8IZF4 528 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 FAM167AQ96KS9 214 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 CDH19Q9H159 772 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 INTS13Q9NVM9 706 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 ZIM2Q9NZV7 527 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 DMTF1Q9Y222 760 aa8.61□□□□□ -1.03
CSDE1-213ENST00000530784 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms