RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 GRAMD1CQ8IYS0 662 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 ARL14EPQ8N8R7 260 aaPredicted RBP22.29■■□□□ 1.16
SMPD1-204ENST00000530395 ELOVL4Q9GZR5 314 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 DLL3Q9NYJ7 618 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 GCNT4Q9P109 453 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 NXF1Q9UBU9 619 aaKnown RBP22.29■■□□□ 1.16
SMPD1-204ENST00000530395 RALGAPA1Q6GYQ0 2036 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 ATG2BQ96BY7 2078 aa22.29■■□□□ 1.16
SMPD1-204ENST00000530395 C2orf78A6NCI8 922 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 A8MXQ7 604 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 RETP07949 1114 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 PTPN1P18031 435 aaKnown RBP22.28■■□□□ 1.16
SMPD1-204ENST00000530395 PPP3CCP48454 512 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 MYL6P60660 151 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 PSMD2Q13200 908 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 BIRC3Q13489 604 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.28■■□□□ 1.16
SMPD1-204ENST00000530395 SH3RF2Q8TEC5 729 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 ZNF516Q92618 1163 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 C8orf48Q96LL4 319 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 P2RY13Q9BPV8 354 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 TTLL2Q9BWV7 592 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 ECT2Q9H8V3 914 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 C2orf42Q9NWW7 574 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 ARHGAP26Q9UNA1 814 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 WNT6Q9Y6F9 365 aa22.28■■□□□ 1.16
SMPD1-204ENST00000530395 F8VP50 259 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 HRO43593 1189 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 ACTN4O43707 911 aaKnown RBP22.27■■□□□ 1.16
SMPD1-204ENST00000530395 LRP3O75074 770 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 TCF3P15923 654 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 GJA4P35212 333 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 NOP14P78316 857 aaKnown RBP22.27■■□□□ 1.16
SMPD1-204ENST00000530395 NR1H3Q13133 447 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 ZNF699Q32M78 642 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 CEP68Q76N32 757 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 WDR5BQ86VZ2 330 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 CHFRQ96EP1 664 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 PAGE5Q96GU1 130 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 GZF1Q9H116 711 aaPredicted RBP22.27■■□□□ 1.16
SMPD1-204ENST00000530395 USP25Q9UHP3 1055 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 SLC8A2Q9UPR5 921 aa22.27■■□□□ 1.16
SMPD1-204ENST00000530395 SPAG17Q6Q759 2223 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 KLRC4O43908 158 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 EGFP01133 1207 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 CASP4P49662 377 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 USP46P62068 366 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 SRSF5Q13243 272 aaKnown RBP22.26■■□□□ 1.15
SMPD1-204ENST00000530395 EML3Q32P44 896 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 FBXO43Q4G163 708 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 B3GALNT2Q8NCR0 500 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 XYLT2Q9H1B5 865 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 DPEP3Q9H4B8 488 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 VRTNQ9H8Y1 702 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 CDV3Q9UKY7 258 aaKnown RBP22.26■■□□□ 1.15
SMPD1-204ENST00000530395 NME7Q9Y5B8 376 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 KIAA1549LQ6ZVL6 1849 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 ATP8B3O60423 1300 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 MYO16Q9Y6X6 1858 aa22.26■■□□□ 1.15
SMPD1-204ENST00000530395 RNF40O75150 1001 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 NFATC1O95644 943 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 MYL1P05976 194 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 PFKFB1P16118 471 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 GALK1P51570 392 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 SPEM2Q0P670 501 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 STK4Q13043 487 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 KMT5BQ4FZB7 885 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 ZNF667Q5HYK9 610 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 TDRD10Q5VZ19 366 aaKnown RBP22.25■■□□□ 1.15
SMPD1-204ENST00000530395 PKN3Q6P5Z2 889 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 KIAA0895Q8NCT3 520 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 PARD3BQ8TEW8 1205 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 CD101Q93033 1021 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 SLITRK1Q96PX8 696 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 PARD6AQ9NPB6 346 aa22.25■■□□□ 1.15
SMPD1-204ENST00000530395 CCDC163A0A0D9SF12 145 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 A0A1B0GVL5 298 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 ZNF840PA6NDX5 716 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 LRRIQ3A6PVS8 624 aaPredicted RBP22.24■■□□□ 1.15
SMPD1-204ENST00000530395 TGM1P22735 817 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 CMA1P23946 247 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 KRT85P78386 507 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 NCOA4Q13772 614 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 SLC9A9Q8IVB4 645 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 TMEM174Q8WUU8 243 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 TNIP3Q96KP6 325 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 SPATA32Q96LK8 384 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 ZNF518BQ9C0D4 1074 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 SMYD3Q9H7B4 428 aa22.24■■□□□ 1.15
SMPD1-204ENST00000530395 PDXKO00764 312 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 ABL1P00519 1130 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 P4HA1P13674 534 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 CLDN10P78369 228 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 SLC7A9P82251 487 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 KIAA1958Q8N8K9 716 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 CCDC26Q8TAB7 109 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 PLEKHO2Q8TD55 490 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 CCDC47Q96A33 483 aaKnown RBP22.23■■□□□ 1.15
SMPD1-204ENST00000530395 B3GNT5Q9BYG0 378 aa22.23■■□□□ 1.15
SMPD1-204ENST00000530395 FBRSL1Q9HCM7 1045 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms