RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 NELL2Q99435 816 aa16.45■□□□□ 0.22
CCDC90B-215ENST00000529745 B3GNT5Q9BYG0 378 aa16.45■□□□□ 0.22
CCDC90B-215ENST00000529745 APOBEC3GQ9HC16 384 aaKnown RBP16.45■□□□□ 0.22
CCDC90B-215ENST00000529745 TMEM30AQ9NV96 361 aa16.45■□□□□ 0.22
CCDC90B-215ENST00000529745 SIT1Q9Y3P8 196 aa16.45■□□□□ 0.22
CCDC90B-215ENST00000529745 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
CCDC90B-215ENST00000529745 CFAP47Q6ZTR5 3102 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 FRYLO94915 3013 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 TRIM49BA6NDI0 452 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 PPP1R3GB7ZBB8 358 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 ZNF263O14978 683 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 PRAMEF12O95522 483 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 TCF3P15923 654 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 ANXA13P27216 316 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 GDI1P31150 447 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 GRIK1P39086 918 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 MAGEA9P43362 315 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 RAP1GAPP47736 663 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 PPP3CCP48454 512 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 MXI1P50539 228 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 SPOPLQ6IQ16 392 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 TTI2Q6NXR4 508 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 SCARA5Q6ZMJ2 495 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 FILIP1Q7Z7B0 1213 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 CELF5Q8N6W0 485 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 STKLD1Q8NE28 680 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 FBXL13Q8NEE6 735 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 BPIFB1Q8TDL5 484 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 LRRC3BQ96PB8 259 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 NIF3L1Q9GZT8 377 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 METTL14Q9HCE5 456 aaKnown RBP16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 LTB4R2Q9NPC1 389 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 MAGED2Q9UNF1 606 aaPredicted RBP16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 MYO16Q9Y6X6 1858 aa16.44■□□□□ 0.22
CCDC90B-215ENST00000529745 F8VP50 259 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 MAN2B1O00754 1011 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 PMM2O15305 246 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 NDST1P52848 882 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 PLCB2Q00722 1185 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 C1orf228Q6PIY5 440 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 TPRG1Q6ZUI0 275 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 FRMD5Q7Z6J6 570 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 FAM35AQ86V20 835 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 FUKQ8N0W3 1084 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 ZNF687Q8N1G0 1237 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 TTC39CQ8N584 583 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 DTWD2Q8NBA8 298 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 SLC35C1Q96A29 364 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 CLDN23Q96B33 292 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 EEF2KMTQ96G04 330 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 DUSP9Q99956 384 aaKnown RBP16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 ZNF518BQ9C0D4 1074 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 CSNK1G1Q9HCP0 422 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 HEBP1Q9NRV9 189 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 TDP1Q9NUW8 608 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 GCNT4Q9P109 453 aa16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 ARMCX3Q9UH62 379 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 EP300Q09472 2414 aaPredicted RBP16.43■□□□□ 0.22
CCDC90B-215ENST00000529745 BICDL2A1A5D9 508 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 FAM92AA1XBS5 289 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 DPYSL4O14531 572 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 CILPO75339 1184 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 RFX1P22670 979 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 AVPR1AP37288 418 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 RPS9P46781 194 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 CACNA2D1P54289 1103 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 TXNDC8Q6A555 127 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 ZNF852Q6ZMS4 543 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 YAF2Q8IY57 180 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 MAB21L3Q8N8X9 362 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 CCDC150Q8NCX0 1101 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 OVCA2Q8WZ82 227 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 SEMA4DQ92854 862 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 USP13Q92995 863 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 NKD2Q969F2 451 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 SMARCD1Q96GM5 515 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 FOXQ1Q9C009 403 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 C8orf33Q9H7E9 229 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 KIAA1468Q9P260 1216 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 MRPS17Q9Y2R5 130 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 BAHCC1Q9P281 2608 aa16.42■□□□□ 0.22
CCDC90B-215ENST00000529745 CLDN5O00501 218 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 STK25O00506 426 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 LRRN2O75325 713 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 RTN3O95197 1032 aaPredicted RBP16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 OLFM2O95897 454 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 TRIM21P19474 475 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 PDE6CP51160 858 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 MARSP56192 900 aaKnown RBP16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 USP46P62068 366 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 USP4Q13107 963 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 FZD5Q13467 585 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms