RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FKBP10Q96AY3 582 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 OSBPL9Q96SU4 736 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 KLK15Q9H2R5 256 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 CERS4Q9HA82 394 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 ASB6Q9NWX5 421 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 SLC17A6Q9P2U8 582 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 HESX1Q9UBX0 185 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 RGS17Q9UGC6 210 aaPredicted RBP5.53□□□□□ -1.52
C11orf88-204ENST00000529661 LRCH1Q9Y2L9 728 aa5.53□□□□□ -1.52
C11orf88-204ENST00000529661 ADGRA2Q96PE1 1338 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 TRIM43BA6NCK2 446 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 LINC00473A8K010 186 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 VWC2LB2RUY7 222 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 TBC1D4O60343 1298 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 GRPP07492 148 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 ABCB4P21439 1286 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 ZNF134P52741 427 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 EIF2B5Q13144 721 aaKnown RBP5.52□□□□□ -1.53
C11orf88-204ENST00000529661 CTBP1Q13363 440 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 AMOTQ4VCS5 1084 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 LAYNQ6UX15 382 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 ZNF783Q6ZMS7 281 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 GRASPQ7Z6J2 395 aaPredicted RBP5.52□□□□□ -1.53
C11orf88-204ENST00000529661 MYLK4Q86YV6 388 aaPredicted RBP5.52□□□□□ -1.53
C11orf88-204ENST00000529661 POF1BQ8WVV4 589 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 KIAA1191Q96A73 305 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 TRIM43Q96BQ3 446 aaPredicted RBP5.52□□□□□ -1.53
C11orf88-204ENST00000529661 FAM136AQ96C01 138 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 HERPUD2Q9BSE4 406 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 SPATA5L1Q9BVQ7 753 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 AMBRA1Q9C0C7 1298 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 ZNF518BQ9C0D4 1074 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 KLC4Q9NSK0 619 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 SACM1LQ9NTJ5 587 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 ST3GAL5Q9UNP4 418 aa5.52□□□□□ -1.53
C11orf88-204ENST00000529661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.52□□□□□ -1.53
C11orf88-204ENST00000529661 A0A1W2PPC4 97 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 APOL1O14791 398 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 EIF5BO60841 1220 aaKnown RBP5.51□□□□□ -1.53
C11orf88-204ENST00000529661 PDHA1P08559 390 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 NR2F6P10588 404 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 ELLP55199 621 aaPredicted RBP5.51□□□□□ -1.53
C11orf88-204ENST00000529661 SLC13A2Q13183 592 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 ARL13BQ3SXY8 428 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 TSTD2Q5T7W7 516 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 ZNF575Q86XF7 245 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 CRB3Q9BUF7 120 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 CPNE5Q9HCH3 593 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 MYO1AQ9UBC5 1043 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 PLEKHM1Q9Y4G2 1056 aa5.51□□□□□ -1.53
C11orf88-204ENST00000529661 DCLK1O15075 740 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 PPM1DO15297 605 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 IGLV2-14P01704 120 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 ATXN1LP0C7T5 689 aaKnown RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 ELFN1P0C7U0 828 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 HALP42357 657 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 PXNP49023 591 aaPredicted RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 RPS16P62249 146 aaKnown RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 TBCCQ15814 346 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 TMEM95Q3KNT9 176 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 KLHDC7AQ5VTJ3 777 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 LIX1LQ8IVB5 337 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 FAM98AQ8NCA5 519 aaKnown RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 NELL1Q92832 810 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 ZNF764Q96H86 408 aaPredicted RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 TMEM41AQ96HV5 264 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
C11orf88-204ENST00000529661 SEMA4GQ9NTN9 838 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 DKK3Q9UBP4 350 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 PAXBP1Q9Y5B6 917 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 COX11Q9Y6N1 276 aa5.5□□□□□ -1.53
C11orf88-204ENST00000529661 A0A087WWL8 130 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 WDR27A2RRH5 827 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 MYO1CO00159 1063 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 MASP2O00187 686 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 AREL1O15033 823 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 ADAMTS3O15072 1205 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 PIP5K1CO60331 668 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 PLA2G6O60733 806 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 TTLL1O95922 423 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 MT-ND5P03915 603 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 EBLN1P0CF75 366 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 ZFXP17010 805 aaPredicted RBP5.49□□□□□ -1.53
C11orf88-204ENST00000529661 LILRA4P59901 499 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 TNFAIP2Q03169 654 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 IQCB1Q15051 598 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 TUBB8Q3ZCM7 444 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 LMBRD2Q68DH5 695 aaPredicted RBP5.49□□□□□ -1.53
C11orf88-204ENST00000529661 SDR16C5Q8N3Y7 309 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 NKAPQ8N5F7 415 aaKnown RBP5.49□□□□□ -1.53
C11orf88-204ENST00000529661 CCDC33Q8N5R6 958 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 PBKQ96KB5 322 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 UROC1Q96N76 676 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 HAPLN3Q96S86 360 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 GDF15Q99988 308 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 ALG8Q9BVK2 526 aa5.49□□□□□ -1.53
C11orf88-204ENST00000529661 SERHLQ9NQF3 203 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms