RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SPATA2LQ8IUW3 424 aaPredicted RBP9.66□□□□□ -0.86
VPS11-203ENST00000529545 PGBD3Q8N328 593 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ARL14EPQ8N8R7 260 aaPredicted RBP9.66□□□□□ -0.86
VPS11-203ENST00000529545 MDGA1Q8NFP4 955 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 RIN3Q8TB24 985 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 LEO1Q8WVC0 666 aaPredicted RBP9.66□□□□□ -0.86
VPS11-203ENST00000529545 EZH1Q92800 747 aaPredicted RBP9.66□□□□□ -0.86
VPS11-203ENST00000529545 PNMA5Q96PV4 448 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ACBD6Q9BR61 282 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ZHX3Q9H4I2 956 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 PARVGQ9HBI0 331 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ZFYVE26Q68DK2 2539 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 LAMA1P25391 3075 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ANKRD11Q6UB99 2663 aaPredicted RBP9.66□□□□□ -0.86
VPS11-203ENST00000529545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 SPAARA0A1B0GVQ0 90 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 UPK3BL1B0FP48 263 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 UPK3BL2E5RIL1 263 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 K7EQS6 105 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 SLC9A3R1O14745 358 aaPredicted RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 TBCAO75347 108 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 IL18RAPO95256 599 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 CFIP05156 583 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 TCF3P15923 654 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 CYP2F1P24903 491 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 HOXD12P35452 270 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 P2RY2P41231 377 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 POU5F1Q01860 360 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 GFPT1Q06210 699 aaPredicted RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 ST3GAL1Q11201 340 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 HNRNPDQ14103 355 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 DHX8Q14562 1220 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 DDR2Q16832 855 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 HSF5Q4G112 596 aaPredicted RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 EOGTQ5NDL2 527 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 LYSMD4Q5XG99 296 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 SLC23A3Q6PIS1 610 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 RABEPKQ7Z6M1 372 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 GPBP1Q86WP2 473 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 SCN4BQ8IWT1 228 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 TMEFF1Q8IYR6 380 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 STKLD1Q8NE28 680 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 CEP76Q8TAP6 659 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 SPATA18Q8TC71 538 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 RLN3Q8WXF3 142 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 CALML4Q96GE6 196 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 SLC22A12Q96S37 553 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 REEP2Q9BRK0 252 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 GTPBP2Q9BX10 602 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 LINC00597Q9H2U6 94 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 TMLHEQ9NVH6 421 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 DDX43Q9NXZ2 648 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 KLK13Q9UKR3 277 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 AGO2Q9UKV8 859 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 SLC6A14Q9UN76 642 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 ARHGAP26Q9UNA1 814 aa9.65□□□□□ -0.86
VPS11-203ENST00000529545 R3HCC1Q9Y3T6 440 aaKnown RBP9.65□□□□□ -0.86
VPS11-203ENST00000529545 ZZEF1O43149 2961 aa9.65□□□□□ -0.87
VPS11-203ENST00000529545 PKD1L2Q7Z442 2459 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 ZBTB24O43167 697 aaPredicted RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 AP5Z1O43299 807 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 SLC26A4O43511 780 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 OPHN1O60890 802 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 TADA3O75528 432 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 KLF8O95600 359 aaPredicted RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 APODP05090 189 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 PFKLP17858 780 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 PCSK1P29120 753 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 OPRD1P41143 372 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 GTF2BQ00403 316 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 SEMA3BQ13214 749 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 POSTNQ15063 836 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 DUOXA1Q1HG43 343 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 ZNF423Q2M1K9 1284 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 RILPL1Q5EBL4 403 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 ARSHQ5FYA8 562 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 INTS6LQ5JSJ4 861 aaKnown RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 ALLCQ8N6M5 410 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 TXNDC5Q8NBS9 432 aaKnown RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 RASSF8Q8NHQ8 419 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 OLIG1Q8TAK6 271 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 CACTINQ8WUQ7 758 aaKnown RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 HMGB4Q8WW32 186 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 POMGNT1Q8WZA1 660 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 FUBP3Q96I24 572 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS11-203ENST00000529545 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 PNKPQ96T60 521 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 PRR14Q9BWN1 585 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.64□□□□□ -0.87
VPS11-203ENST00000529545 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 TRPM5Q9NZQ8 1165 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 GCNT4Q9P109 453 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 GTF3C4Q9UKN8 822 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
VPS11-203ENST00000529545 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms