RNA–Protein interactions for RNA: ENST00000529224.1

SSH3-206, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-206ENST00000529224 SPAG17Q6Q759 2223 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 DMXL1Q9Y485 3027 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 TRAV19A0A0A6YYK7 116 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 F8VP50 259 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 TRIM21P19474 475 aaKnown RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 RPS9P46781 194 aaKnown RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 GCLMP48507 274 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 PDE6CP51160 858 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 KPNA1P52294 538 aaPredicted RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 PPP3CAQ08209 521 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 STIM1Q13586 685 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 ZNF268Q14587 947 aaPredicted RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 CCDC150Q8NCX0 1101 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 FAM3CQ92520 227 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 TTLL2Q9BWV7 592 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 B3GNT5Q9BYG0 378 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 ZNF518BQ9C0D4 1074 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 SMG9Q9H0W8 520 aaKnown RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 SDCBP2Q9H190 292 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
SSH3-206ENST00000529224 NDRG2Q9UN36 371 aaKnown RBP13.92□□□□□ -0.18
SSH3-206ENST00000529224 DNAH14Q0VDD8 3507 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 CLDN5O00501 218 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 STX10O60499 249 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 USP17L7P0C7H9 530 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 PFKLP17858 780 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 PPP1R2P41236 205 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 PPP3CCP48454 512 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 MCCD1P59942 119 aaPredicted RBP13.91□□□□□ -0.18
SSH3-206ENST00000529224 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
SSH3-206ENST00000529224 LRRC63Q05C16 580 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 FZD5Q13467 585 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 SPOPLQ6IQ16 392 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 UNC93AQ86WB7 457 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 ZNF687Q8N1G0 1237 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 ERCC4Q92889 916 aaPredicted RBP13.91□□□□□ -0.18
SSH3-206ENST00000529224 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 ZFYVE19Q96K21 471 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 MED10Q9BTT4 135 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 CYP3A43Q9HB55 503 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 TRPC7Q9HCX4 862 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 SPATA6Q9NWH7 488 aaPredicted RBP13.91□□□□□ -0.18
SSH3-206ENST00000529224 TRPM5Q9NZQ8 1165 aa13.91□□□□□ -0.18
SSH3-206ENST00000529224 RALGAPA1Q6GYQ0 2036 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 PSMA7O14818 248 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 SLC16A3O15427 465 aaKnown RBP13.9□□□□□ -0.18
SSH3-206ENST00000529224 LAMTOR5O43504 91 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 RTN3O95197 1032 aaPredicted RBP13.9□□□□□ -0.18
SSH3-206ENST00000529224 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
SSH3-206ENST00000529224 CKMP06732 381 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 CCNE1P24864 410 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 CTHP32929 405 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 ASPAP45381 313 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 NDST1P52848 882 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 KRT39Q6A163 491 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 CC2D1AQ6P1N0 951 aaPredicted RBP13.9□□□□□ -0.18
SSH3-206ENST00000529224 ACOT1Q86TX2 421 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 FAM35AQ86V20 835 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
SSH3-206ENST00000529224 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
SSH3-206ENST00000529224 TAS1R2Q8TE23 839 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 IER2Q9BTL4 223 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 DNAI2Q9GZS0 605 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.9□□□□□ -0.18
SSH3-206ENST00000529224 GKN1Q9NS71 199 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 CCL26Q9Y258 94 aa13.9□□□□□ -0.18
SSH3-206ENST00000529224 OTOGLQ3ZCN5 2332 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 SPECC1L-ADORA2AF8WAN1 911 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 GADD45BO75293 160 aaPredicted RBP13.89□□□□□ -0.19
SSH3-206ENST00000529224 HDCP19113 662 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 MXI1P50539 228 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 USP46P62068 366 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 ITPRIPL2Q3MIP1 535 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 NUP93Q8N1F7 819 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 CRYBG2Q8N1P7 616 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 ARL14EPQ8N8R7 260 aaPredicted RBP13.89□□□□□ -0.19
SSH3-206ENST00000529224 DHTKD1Q96HY7 919 aaPredicted RBP13.89□□□□□ -0.19
SSH3-206ENST00000529224 FAXDC2Q96IV6 333 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 SLITRK1Q96PX8 696 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 FAM83CQ9BQN1 747 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 CHRDQ9H2X0 955 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 APOBEC3GQ9HC16 384 aaKnown RBP13.89□□□□□ -0.19
SSH3-206ENST00000529224 DMAP1Q9NPF5 467 aaPredicted RBP13.89□□□□□ -0.19
SSH3-206ENST00000529224 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 CHMP5Q9NZZ3 219 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 GCNT4Q9P109 453 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
SSH3-206ENST00000529224 C2orf78A6NCI8 922 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms