RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 UPK3BL2E5RIL1 263 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 H0YCG3 227 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 LEFTY2O00292 366 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 KDSRQ06136 332 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 SV2CQ496J9 727 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 INTS6LQ5JSJ4 861 aaKnown RBP20.37■□□□□ 0.85
SSRP1-204ENST00000529002 ADALQ6DHV7 355 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 CRELD2Q6UXH1 353 aaPredicted RBP20.37■□□□□ 0.85
SSRP1-204ENST00000529002 FILIP1Q7Z7B0 1213 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 MINDY1Q8N5J2 469 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 ZSWIM2Q8NEG5 633 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 CCDC26Q8TAB7 109 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 LEO1Q8WVC0 666 aaPredicted RBP20.37■□□□□ 0.85
SSRP1-204ENST00000529002 COL26A1Q96A83 441 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 ERLEC1Q96DZ1 483 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 ASB7Q9H672 318 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.37■□□□□ 0.85
SSRP1-204ENST00000529002 ARHGAP26Q9UNA1 814 aa20.37■□□□□ 0.85
SSRP1-204ENST00000529002 OPHN1O60890 802 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 POLR2BP30876 1174 aaKnown RBP20.36■□□□□ 0.85
SSRP1-204ENST00000529002 PRPHP41219 470 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 USP46P62068 366 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 ATP2C1P98194 919 aaPredicted RBP20.36■□□□□ 0.85
SSRP1-204ENST00000529002 GFPT1Q06210 699 aaPredicted RBP20.36■□□□□ 0.85
SSRP1-204ENST00000529002 TMEM119Q4V9L6 283 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 PEAR1Q5VY43 1037 aaPredicted RBP20.36■□□□□ 0.85
SSRP1-204ENST00000529002 GPBP1Q86WP2 473 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 MDM1Q8TC05 714 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 HNRNPLLQ8WVV9 542 aaKnown RBP20.36■□□□□ 0.85
SSRP1-204ENST00000529002 KCNN1Q92952 543 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 FIZ1Q96SL8 496 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 ZHX3Q9H4I2 956 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 CAPN10Q9HC96 672 aa20.36■□□□□ 0.85
SSRP1-204ENST00000529002 POLMQ9NP87 494 aaPredicted RBP20.36■□□□□ 0.85
SSRP1-204ENST00000529002 H0Y626 953 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 SH3BP5O60239 455 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 ATP2C2O75185 946 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 FAM13AO94988 1023 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 KAT7O95251 611 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 TRIM16O95361 564 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 TCF3P15923 654 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 KIR2DL1P43626 348 aaPredicted RBP20.35■□□□□ 0.85
SSRP1-204ENST00000529002 RPL6Q02878 288 aaKnown RBP20.35■□□□□ 0.85
SSRP1-204ENST00000529002 DHCR24Q15392 516 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 DUOXA1Q1HG43 343 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 ADGRG2Q8IZP9 1017 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 CDK5RAP3Q96JB5 506 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 PNKPQ96T60 521 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 ACBD6Q9BR61 282 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 RNF38Q9H0F5 515 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 ABCB6Q9NP58 842 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 SMPD4Q9NXE4 827 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 KCND2Q9NZV8 630 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 AGO2Q9UKV8 859 aaKnown RBP20.35■□□□□ 0.85
SSRP1-204ENST00000529002 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 SHROOM3Q8TF72 1996 aa20.35■□□□□ 0.85
SSRP1-204ENST00000529002 VWA3AA6NCI4 1184 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 MYMKA6NI61 221 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 TRAK2O60296 914 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 SERPINF2P08697 491 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 ZNF423Q2M1K9 1284 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 RHBDF2Q6PJF5 856 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 SPATA2LQ8IUW3 424 aaPredicted RBP20.34■□□□□ 0.85
SSRP1-204ENST00000529002 ZNF560Q96MR9 790 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 ODF2LQ9ULJ1 636 aa20.34■□□□□ 0.85
SSRP1-204ENST00000529002 LAD1O00515 517 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 APODP05090 189 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 ITGB3P05106 788 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 RDXP35241 583 aaKnown RBP20.33■□□□□ 0.85
SSRP1-204ENST00000529002 WASP42768 502 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 ZNF131P52739 623 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 TFAMQ00059 246 aaKnown RBP20.33■□□□□ 0.85
SSRP1-204ENST00000529002 GTF2BQ00403 316 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 TRIP6Q15654 476 aaKnown RBP20.33■□□□□ 0.85
SSRP1-204ENST00000529002 EOGTQ5NDL2 527 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 SLC41A1Q8IVJ1 513 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 FSIP1Q8NA03 581 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 SPATA18Q8TC71 538 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 PARVGQ9HBI0 331 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 ARHGEF4Q9NR80 690 aa20.33■□□□□ 0.85
SSRP1-204ENST00000529002 BPTFQ12830 3046 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 ARHGAP33O14559 1287 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 HUS1O60921 280 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 FTH1P19P0C7X4 201 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 GABRG2P18507 467 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 PLCG1P19174 1290 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 PSMC1P62191 440 aaKnown RBP20.32■□□□□ 0.84
SSRP1-204ENST00000529002 MYL7Q01449 175 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 ZNF33AQ06730 810 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 RESTQ13127 1097 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 MCM6Q14566 821 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 LMBRD2Q68DH5 695 aaPredicted RBP20.32■□□□□ 0.84
SSRP1-204ENST00000529002 C1orf127Q8N9H9 656 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 CD93Q9NPY3 652 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 BLOC1S4Q9NUP1 217 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 RAXQ9Y2V3 346 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 CPQQ9Y646 472 aa20.32■□□□□ 0.84
SSRP1-204ENST00000529002 ADSSP30520 456 aa20.31■□□□□ 0.84
SSRP1-204ENST00000529002 CFAP221Q4G0U5 840 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms