RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PARP1P09874 1014 aaKnown RBP6.99□□□□□ -1.29
PCF11-202ENST00000528336 CARSP49589 748 aaKnown RBP6.99□□□□□ -1.29
PCF11-202ENST00000528336 MAPK10P53779 464 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 DAG1Q14118 895 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 SLC29A2Q14542 456 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 LONRF1Q17RB8 773 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 INSCQ1MX18 579 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 KLHDC7AQ5VTJ3 777 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 KIAA0895LQ68EN5 471 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 MAVSQ7Z434 540 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 DTX2Q86UW9 622 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 TMTC2Q8N394 836 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 TMEM171Q8WVE6 324 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 AGAP2Q99490 1192 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 BRIP1Q9BX63 1249 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 GBA2Q9HCG7 927 aaPredicted RBP6.99□□□□□ -1.29
PCF11-202ENST00000528336 XPNPEP3Q9NQH7 507 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 MID2Q9UJV3 735 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 ST3GAL5Q9UNP4 418 aa6.99□□□□□ -1.29
PCF11-202ENST00000528336 FOXN3O00409 490 aaPredicted RBP6.98□□□□□ -1.29
PCF11-202ENST00000528336 SLC16A3O15427 465 aaKnown RBP6.98□□□□□ -1.29
PCF11-202ENST00000528336 RGS10O43665 173 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 CSF1RP07333 972 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 TXNP10599 105 aaKnown RBP6.98□□□□□ -1.29
PCF11-202ENST00000528336 ZFXP17010 805 aaPredicted RBP6.98□□□□□ -1.29
PCF11-202ENST00000528336 PTDSS1P48651 473 aaKnown RBP6.98□□□□□ -1.29
PCF11-202ENST00000528336 CLCN2P51788 898 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 SIM1P81133 766 aaPredicted RBP6.98□□□□□ -1.29
PCF11-202ENST00000528336 ARHGEF7Q14155 803 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 NBPF8Q3BBV2 869 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 OLFML1Q6UWY5 402 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 RNF44Q7L0R7 432 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 YAF2Q8IY57 180 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 SPARTQ8N0X7 666 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 ATRIPQ8WXE1 791 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 GLG1Q92896 1179 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 ALG8Q9BVK2 526 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 EHD3Q9NZN3 535 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 FOXJ2Q9P0K8 574 aa6.98□□□□□ -1.29
PCF11-202ENST00000528336 POLR2AP24928 1970 aaKnown RBP6.97□□□□□ -1.29
PCF11-202ENST00000528336 WDR27A2RRH5 827 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 TLR5O60602 858 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 SRGAP2O75044 1071 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 GRIA3P42263 894 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 STT3AP46977 705 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 PDE6CP51160 858 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 CASP5P51878 434 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 RHBDL3P58872 404 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
PCF11-202ENST00000528336 LY6KQ17RY6 165 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 ERCC6LQ2NKX8 1250 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 TREML2Q5T2D2 321 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 RRAGBQ5VZM2 374 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 PCSK4Q6UW60 755 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 C11orf96Q7Z7L8 435 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 DNAJB14Q8TBM8 379 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 OSCP1Q8WVF1 389 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 SLC9A6Q92581 669 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 RFKQ969G6 155 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 PDLIM2Q96JY6 352 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 PBKQ96KB5 322 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 GLOD4Q9HC38 313 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 ZNF212Q9UDV6 495 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 CDY1Q9Y6F8 540 aa6.97□□□□□ -1.29
PCF11-202ENST00000528336 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.3
PCF11-202ENST00000528336 LINC00473A8K010 186 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 MGST3O14880 152 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 ORC4O43929 436 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 PLIN1O60240 522 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 FESP07332 822 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 ELFN1P0C7U0 828 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 TYRP1P17643 537 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 BTF3P20290 206 aaKnown RBP6.96□□□□□ -1.3
PCF11-202ENST00000528336 ACVR2AP27037 513 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 LIPAP38571 399 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 RARRES1P49788 294 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 BMPR2Q13873 1038 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 NPY5RQ15761 445 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 ABRAQ8N0Z2 381 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 IPCEF1Q8WWN9 437 aaPredicted RBP6.96□□□□□ -1.3
PCF11-202ENST00000528336 R3HDM4Q96D70 268 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 IQCDQ96DY2 449 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 PCGF6Q9BYE7 350 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 GJB4Q9NTQ9 266 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 PHTF1Q9UMS5 762 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 SNX14Q9Y5W7 946 aa6.96□□□□□ -1.3
PCF11-202ENST00000528336 A1L4Q6 167 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 CCDC151A5D8V7 595 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 KIAA0355O15063 1070 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 RRP9O43818 475 aaKnown RBP6.95□□□□□ -1.3
PCF11-202ENST00000528336 VNN1O95497 513 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 ANXA2P07355 339 aaKnown RBP6.95□□□□□ -1.3
PCF11-202ENST00000528336 TPH1P17752 444 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 IL1R2P27930 398 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 ALDH9A1P49189 494 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 CPT1AP50416 773 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 PDE1AP54750 535 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 STK3Q13188 491 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 ZNF618Q5T7W0 954 aa6.95□□□□□ -1.3
PCF11-202ENST00000528336 TEDDM1Q5T9Z0 273 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms