RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PSMA7O14818 248 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 PDE6CP51160 858 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 CACNA2D1P54289 1103 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 FZD5Q13467 585 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 ANKRD40Q6AI12 368 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 FAM35AQ86V20 835 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 CCDC150Q8NCX0 1101 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 EEF2KMTQ96G04 330 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 DHTKD1Q96HY7 919 aaPredicted RBP35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 NIF3L1Q9GZT8 377 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 APOBEC3GQ9HC16 384 aaKnown RBP35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 CHMP5Q9NZZ3 219 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 GCNT4Q9P109 453 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 CCL26Q9Y258 94 aa35.13■■■■□ 3.21
SSSCA1-205ENST00000527920 CLDN5O00501 218 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 GADD45BO75293 160 aaPredicted RBP35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 USP17L7P0C7H9 530 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 NDST1P52848 882 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 PMS1P54277 932 aaKnown RBP35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 USP46P62068 366 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 RALGPS2Q86X27 583 aaPredicted RBP35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 IER2Q9BTL4 223 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 TRPM5Q9NZQ8 1165 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 MAN1B1Q9UKM7 699 aa35.12■■■■□ 3.21
SSSCA1-205ENST00000527920 GREB1Q4ZG55 1949 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 TRIM21P19474 475 aaKnown RBP35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 CCNE1P24864 410 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 MXI1P50539 228 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 KPNA1P52294 538 aaPredicted RBP35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 FOXR2Q6PJQ5 311 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 PAQR9Q6ZVX9 377 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 ACOT1Q86TX2 421 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 SMARCD1Q96GM5 515 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 ZFYVE19Q96K21 471 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 FAM83CQ9BQN1 747 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 TRPC7Q9HCX4 862 aa35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 DMAP1Q9NPF5 467 aaPredicted RBP35.11■■■■□ 3.21
SSSCA1-205ENST00000527920 KIF26AQ9ULI4 1882 aaPredicted RBP35.1■■■■□ 3.21
SSSCA1-205ENST00000527920 FUKQ8N0W3 1084 aa35.1■■■■□ 3.21
SSSCA1-205ENST00000527920 FBXL13Q8NEE6 735 aa35.1■■■■□ 3.21
SSSCA1-205ENST00000527920 RTN3O95197 1032 aaPredicted RBP35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 CKMP06732 381 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 TCF3P15923 654 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 CTHP32929 405 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 NUP93Q8N1F7 819 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 SLC22A12Q96S37 553 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 MED10Q9BTT4 135 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 FAM124BQ9H5Z6 455 aaPredicted RBP35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 MMRN2Q9H8L6 949 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 GTSE1Q9NYZ3 720 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 HMGXB4Q9UGU5 601 aa35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 NDRG2Q9UN36 371 aaKnown RBP35.09■■■■□ 3.21
SSSCA1-205ENST00000527920 ZNF840PA6NDX5 716 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 SPECC1L-ADORA2AF8WAN1 911 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 USP4Q13107 963 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 ITPRIPL2Q3MIP1 535 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 MAMSTRQ6ZN01 415 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 OVCA2Q8WZ82 227 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 SLITRK1Q96PX8 696 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 GKN1Q9NS71 199 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 SPATA6Q9NWH7 488 aaPredicted RBP35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 FBXO4Q9UKT5 387 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 ARHGAP26Q9UNA1 814 aa35.08■■■■□ 3.21
SSSCA1-205ENST00000527920 C2orf78A6NCI8 922 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 UBE2HP62256 183 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 ZNF77Q15935 545 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 CC2D1AQ6P1N0 951 aaPredicted RBP35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 TTC39CQ8N584 583 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 CEP63Q96MT8 703 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 CYP2S1Q96SQ9 504 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 NT5C1AQ9BXI3 368 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 DNAI2Q9GZS0 605 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 CHRDQ9H2X0 955 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 KRT82Q9NSB4 513 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 COMMD8Q9NX08 183 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 RAB20Q9NX57 234 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 IL37Q9NZH6 218 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 ARMCX3Q9UH62 379 aaPredicted RBP35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 COQ4Q9Y3A0 265 aa35.07■■■■□ 3.2
SSSCA1-205ENST00000527920 TRIM49BA6NDI0 452 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 HDCP19113 662 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 TNK2Q07912 1038 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 TAF10Q12962 218 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 MORC3Q14149 939 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 PDGFRLQ15198 375 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 ZNF528Q3MIS6 628 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 MAML2Q8IZL2 1156 aaPredicted RBP35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 ARL14EPQ8N8R7 260 aaPredicted RBP35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 PDZD8Q8NEN9 1154 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 RIN3Q8TB24 985 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 SEMA4DQ92854 862 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 KCNK16Q96T55 309 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 CSNK1G1Q9HCP0 422 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 CACNA1IQ9P0X4 2223 aa35.06■■■■□ 3.2
SSSCA1-205ENST00000527920 TNFRSF10BO14763 440 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 LAMTOR5O43504 91 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 CILPO75339 1184 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 AP1G2O75843 785 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 OLFM2O95897 454 aa35.05■■■■□ 3.2
SSSCA1-205ENST00000527920 CD44P16070 742 aaKnown RBP35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms