RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 TANC1Q9C0D5 1861 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MYO16Q9Y6X6 1858 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 C2orf71A6NGG8 1288 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 SLC15A5A6NIM6 579 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 B4DLN1 442 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 KCNJ18B7U540 433 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 WNT9AO14904 365 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 NKRFO15226 690 aaKnown RBP eCLIP4.52□□□□□ -1.69
CD44-226ENST00000527889 MEFVO15553 781 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 TEX33O43247 280 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 STBD1O95210 358 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 LYPLA2O95372 231 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 GCNT3O95395 438 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 GSNP06396 782 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 SRGAP2CP0DJJ0 459 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 RBP3P10745 1247 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 LCP1P13796 627 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 GAP43P17677 238 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 RAB6AP20340 208 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 CCND1P24385 295 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 NMT1P30419 496 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 MAPK4P31152 587 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 YWHABP31946 246 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 HOXD13P35453 343 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MAP2K2P36507 400 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 LTBRP36941 435 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 RECQLP46063 649 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 PREPP48147 710 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 COPB1P53618 953 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 OCRLQ01968 901 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 GRB14Q14449 540 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 KCNJ12Q14500 433 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 NEDD9Q14511 834 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MINDY4Q4G0A6 757 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ZC2HC1CQ53FD0 456 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 COBLL1Q53SF7 1204 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 E4F1Q66K89 784 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 CENPPQ6IPU0 288 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 CDPF1Q6NVV7 123 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 CCDC62Q6P9F0 684 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ANO5Q75V66 913 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 EPM2AIP1Q7L775 607 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 OVCH1Q7RTY7 1134 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 APTXQ7Z2E3 356 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 CCDC186Q7Z3E2 898 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 C11orf74Q86VG3 221 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 IRF2BP1Q8IU81 584 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 C4orf19Q8IY42 314 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 SMAP1Q8IYB5 467 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 DAW1Q8N136 415 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 GUF1Q8N442 669 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 MYCT1Q8N699 235 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 CSGALNACT2Q8N6G5 542 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 DTWD2Q8NBA8 298 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 C1orf162Q8NEQ5 155 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 RDM1Q8NG50 284 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 SCFD1Q8WVM8 642 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ATP6V0A1Q93050 837 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 FAXDC2Q96IV6 333 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MAML3Q96JK9 1138 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 CNOT6LQ96LI5 555 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 Q96M66 194 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 UBL7Q96S82 380 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 PCYT2Q99447 389 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 SARGQ9BW04 601 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 INO80BQ9C086 356 aaPredicted RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 VPS16Q9H269 839 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 IKZF4Q9H2S9 585 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 PRO3102Q9H379 93 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 KCNF1Q9H3M0 494 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 SEMA6CQ9H3T2 930 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MRPL44Q9H9J2 332 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 MLXIPQ9HAP2 919 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 PARVGQ9HBI0 331 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ZNF302Q9NR11 478 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 DBR1Q9UK59 544 aaKnown RBP4.52□□□□□ -1.69
CD44-226ENST00000527889 GIT1Q9Y2X7 761 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.52□□□□□ -1.69
CD44-226ENST00000527889 SHROOM3Q8TF72 1996 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 ZMYM2Q9UBW7 1377 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 MYO7AQ13402 2215 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 NLRC5Q86WI3 1866 aa4.52□□□□□ -1.69
CD44-226ENST00000527889 NUP205Q92621 2012 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 KIAA1671Q9BY89 1806 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 VWA8A3KMH1 1905 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 PTPRSQ13332 1948 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 GOLGA6L6A8MZA4 724 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 K7ENM7 598 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 PES1O00541 588 aaKnown RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 CLIC2O15247 247 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 DYNC1LI2O43237 492 aaPredicted RBP4.51□□□□□ -1.69
CD44-226ENST00000527889 ADCY6O43306 1168 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 STRNO43815 780 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 TLR2O60603 784 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 ADAM23O75077 832 aa4.51□□□□□ -1.69
CD44-226ENST00000527889 SNAI1O95863 264 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms