RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ACSS3Q9H6R3 686 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 UBAP1Q9NZ09 502 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 HBS1LQ9Y450 684 aaKnown RBP13.02□□□□□ -0.32
TSKU-203ENST00000527881 CLUHO75153 1309 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 CYB561D2O14569 222 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 CRTAMO95727 393 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 ITPRIPL1Q6GPH6 555 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 PPP1R18Q6NYC8 613 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 ADGRG6Q86SQ4 1221 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 WDR75Q8IWA0 830 aaKnown RBP13.02□□□□□ -0.32
TSKU-203ENST00000527881 TTC13Q8NBP0 860 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 CFAP36Q96G28 342 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 PAIP1Q9H074 479 aaKnown RBP13.02□□□□□ -0.32
TSKU-203ENST00000527881 STRIP2Q9ULQ0 834 aa13.02□□□□□ -0.32
TSKU-203ENST00000527881 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 LSM1O15116 133 aaKnown RBP13.02□□□□□ -0.33
TSKU-203ENST00000527881 NTSR2O95665 410 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 C16orf86Q6ZW13 317 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 CHSY1Q86X52 802 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 RSAD2Q8WXG1 361 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 PLGRKTQ9HBL7 147 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 TBC1D23Q9NUY8 699 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
TSKU-203ENST00000527881 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 POMPQ9Y244 141 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 DLEC1Q9Y238 1755 aa13.02□□□□□ -0.33
TSKU-203ENST00000527881 ARHGEF35A5YM69 484 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 PROSCO94903 275 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 HALP42357 657 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 ATP1A4Q13733 1029 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 FNBP1LQ5T0N5 605 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 DQX1Q8TE96 717 aaKnown RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 CAAP1Q9H8G2 361 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 MTMR4Q9NYA4 1195 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 SAE1Q9UBE0 346 aaPredicted RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 CDH22Q9UJ99 828 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 HEY1Q9Y5J3 304 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 TNS2Q63HR2 1409 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 A0A1B0GUL6 1792 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 FOXD2O60548 495 aaPredicted RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 HOXA13P31271 388 aaPredicted RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 NT5C2P49902 561 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 KLF1Q13351 362 aaPredicted RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 BTG3Q14201 252 aaPredicted RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 TBCCQ15814 346 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 GRIK5Q16478 980 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 MSS51Q4VC12 460 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 ANKRD22Q5VYY1 191 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 CROCCP3Q8IVE0 287 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 IRGQQ8WZA9 623 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 TLR3O15455 904 aaKnown RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 DNAJA2O60884 412 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 CBFA2T3O75081 653 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 STX3Q13277 289 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 SF3B3Q15393 1217 aaKnown RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 CLEC16AQ2KHT3 1053 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 QRICH1Q2TAL8 776 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 RNASEH2BQ5TBB1 312 aaKnown RBP13.01□□□□□ -0.33
TSKU-203ENST00000527881 PACS1Q6VY07 963 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 ZNF410Q86VK4 478 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 MCOLN2Q8IZK6 566 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 SLC35B4Q969S0 331 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 NUF2Q9BZD4 464 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
TSKU-203ENST00000527881 C6orf229H3BNL8 230 aa13□□□□□ -0.33
TSKU-203ENST00000527881 FAM155BO75949 473 aa13□□□□□ -0.33
TSKU-203ENST00000527881 AKR1B1P15121 316 aa13□□□□□ -0.33
TSKU-203ENST00000527881 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 C16orf87Q6PH81 154 aa13□□□□□ -0.33
TSKU-203ENST00000527881 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
TSKU-203ENST00000527881 ZBTB46Q86UZ6 589 aa13□□□□□ -0.33
TSKU-203ENST00000527881 PQLC1Q8N2U9 271 aa13□□□□□ -0.33
TSKU-203ENST00000527881 ALLCQ8N6M5 410 aa13□□□□□ -0.33
TSKU-203ENST00000527881 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
TSKU-203ENST00000527881 FAM81BQ96LP2 452 aa13□□□□□ -0.33
TSKU-203ENST00000527881 HAUS8Q9BT25 410 aa13□□□□□ -0.33
TSKU-203ENST00000527881 PI4K2AQ9BTU6 479 aa13□□□□□ -0.33
TSKU-203ENST00000527881 BRD8Q9H0E9 1235 aa13□□□□□ -0.33
TSKU-203ENST00000527881 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
TSKU-203ENST00000527881 COPS7BQ9H9Q2 264 aaPredicted RBP13□□□□□ -0.33
TSKU-203ENST00000527881 SERPINA6P08185 405 aa13□□□□□ -0.33
TSKU-203ENST00000527881 WEE2P0C1S8 567 aa13□□□□□ -0.33
TSKU-203ENST00000527881 OCM2P0CE71 109 aa13□□□□□ -0.33
TSKU-203ENST00000527881 OCMP0CE72 109 aaPredicted RBP13□□□□□ -0.33
TSKU-203ENST00000527881 CDH2P19022 906 aaPredicted RBP13□□□□□ -0.33
TSKU-203ENST00000527881 MSX2P35548 267 aaPredicted RBP13□□□□□ -0.33
TSKU-203ENST00000527881 PHEXP78562 749 aa13□□□□□ -0.33
TSKU-203ENST00000527881 BMPR2Q13873 1038 aa13□□□□□ -0.33
TSKU-203ENST00000527881 KRT80Q6KB66 452 aa13□□□□□ -0.33
TSKU-203ENST00000527881 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
TSKU-203ENST00000527881 XXYLT1Q8NBI6 393 aa13□□□□□ -0.33
TSKU-203ENST00000527881 ZSWIM2Q8NEG5 633 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms