RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CCDC192P0DO97 292 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 CYP24A1Q07973 514 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 ZNF77Q15935 545 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 CSRP2Q16527 193 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 CGRRF1Q99675 332 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 LINC00597Q9H2U6 94 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 GCNT4Q9P109 453 aa23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 NXF1Q9UBU9 619 aaKnown RBP23.89■■□□□ 1.41
TRAPPC4-208ENST00000527680 UBE4BO95155 1302 aa23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 RPP40O75818 363 aaKnown RBP23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 ZSCAN22P10073 491 aaPredicted RBP23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 PDIA4P13667 645 aaKnown RBP23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 FBXO43Q4G163 708 aa23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 HSCBQ8IWL3 235 aa23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 CD101Q93033 1021 aa23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 CEP295NLQ96MC4 621 aa23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 ANAPC1Q9H1A4 1944 aa23.88■■□□□ 1.41
TRAPPC4-208ENST00000527680 EXOC3O60645 756 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 TACC1O75410 805 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 PTPN1P18031 435 aaKnown RBP23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 USP46P62068 366 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 EML3Q32P44 896 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 NAIF1Q69YI7 327 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 PRR23CQ6ZRP0 262 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 CACNA2D4Q7Z3S7 1137 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 CEP57L1Q8IYX8 460 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 NETO1Q8TDF5 533 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 GAB3Q8WWW8 586 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 SNX21Q969T3 373 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 POLR3BQ9NW08 1133 aaPredicted RBP23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 CGNQ9P2M7 1197 aaKnown RBP23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 PCDHA7Q9UN72 937 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 ARHGAP26Q9UNA1 814 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 DNAH14Q0VDD8 3507 aa23.87■■□□□ 1.41
TRAPPC4-208ENST00000527680 CCDC163A0A0D9SF12 145 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 PVALEFA0A1B0GWK0 134 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 A8MXQ7 604 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 F8VP50 259 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 FAM163BP0C2L3 166 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 MYL6P60660 151 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 IFRD2Q12894 506 aaPredicted RBP23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 USP4Q13107 963 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 CUL4BQ13620 913 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 KNOP1Q1ED39 458 aaKnown RBP23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 TDRD10Q5VZ19 366 aaKnown RBP23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 CAMKK1Q8N5S9 505 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 RPLP0P6Q8NHW5 317 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 ZNF516Q92618 1163 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 CFAP45Q9UL16 551 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 GREB1Q4ZG55 1949 aa23.86■■□□□ 1.41
TRAPPC4-208ENST00000527680 FOXD2O60548 495 aaPredicted RBP23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 NFATC1O95644 943 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 F13A1P00488 732 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 PPP3CCP48454 512 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 BIRC3Q13489 604 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 SYAP1Q96A49 352 aaPredicted RBP23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 C8orf48Q96LL4 319 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 HHIPQ96QV1 700 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 ARRDC1-AS1Q9H2J1 176 aa23.85■■□□□ 1.41
TRAPPC4-208ENST00000527680 LEFTY2O00292 366 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 PFKLP17858 780 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 ATICP31939 592 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 EHHADHQ08426 723 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 KBTBD6Q86V97 674 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 SPRYD3Q8NCJ5 442 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 SLITRK1Q96PX8 696 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 ELOVL4Q9GZR5 314 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 DPEP3Q9H4B8 488 aa23.84■■□□□ 1.41
TRAPPC4-208ENST00000527680 SPTBN2O15020 2390 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 ZNF840PA6NDX5 716 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 GDF9O60383 454 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 CASP4P49662 377 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 NOP14P78316 857 aaKnown RBP23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 TAF10Q12962 218 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 CCDC6Q16204 474 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 AASDHQ4L235 1098 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 RESP18Q5W5W9 173 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 ATL3Q6DD88 541 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 GRAMD1CQ8IYS0 662 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 C12orf50Q8NA57 414 aaPredicted RBP23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 CCDC26Q8TAB7 109 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 GOLGA5Q8TBA6 731 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 LOXL4Q96JB6 756 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 TTLL2Q9BWV7 592 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 RNF38Q9H0F5 515 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 SMPD4Q9NXE4 827 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 SERTAD1Q9UHV2 236 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 NME7Q9Y5B8 376 aa23.83■■□□□ 1.41
TRAPPC4-208ENST00000527680 SPAG17Q6Q759 2223 aa23.83■■□□□ 1.4
TRAPPC4-208ENST00000527680 CLDN5O00501 218 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 SLC30A4O14863 429 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 TCF3P15923 654 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 DMC1Q14565 340 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 BMT2Q1RMZ1 405 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 SYT13Q7L8C5 426 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 C12orf56Q8IXR9 622 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 B3GALNT2Q8NCR0 500 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 ACDQ96AP0 544 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 MED10Q9BTT4 135 aa23.82■■□□□ 1.4
TRAPPC4-208ENST00000527680 B3GNT5Q9BYG0 378 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms