RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 SLC22A25Q6T423 547 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 GADL1Q6ZQY3 521 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 MFSD6Q6ZSS7 791 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 R3HCC1LQ7Z5L2 792 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 DNAJB7Q7Z6W7 309 aaPredicted RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 RSPH3Q86UC2 560 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ZC3H18Q86VM9 953 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 FAM90A1Q86YD7 464 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 SLC44A2Q8IWA5 706 aaPredicted RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CCDC117Q8IWD4 279 aaPredicted RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CEP57L1Q8IYX8 460 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CARNMT1Q8N4J0 409 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 MSANTD4Q8NCY6 345 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 MGARPQ8TDB4 240 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ZNF384Q8TF68 577 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 TBC1D22AQ8WUA7 517 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 RNF125Q96EQ8 232 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CNDP2Q96KP4 475 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 SPATA17Q96L03 361 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 GPATCH1Q9BRR8 931 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 TWSG1Q9GZX9 223 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 SIL1Q9H173 461 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 MRPL46Q9H2W6 279 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 TAF1DQ9H5J8 278 aaPredicted RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ACAD9Q9H845 621 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 GRPEL1Q9HAV7 217 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 SLC39A2Q9NP94 309 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 DIAPH3Q9NSV4 1193 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 UCKL1Q9NWZ5 548 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 CALCOCO1Q9P1Z2 691 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 RPS6KA6Q9UK32 745 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 ZFR2Q9UPR6 939 aaKnown RBP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 WASF3Q9UPY6 502 aa4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.25□□□□□ -1.73
CLNS1A-208ENST00000527265 C17orf113A0A1B0GUU1 675 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PATE3B3GLJ2 98 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PYCARD-AS1I3L0S3 204 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 GTPBP1O00178 669 aaKnown RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 KIAA0355O15063 1070 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 TBC1D4O60343 1298 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 USP1O94782 785 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 SEC24DO94855 1032 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ENDOD1O94919 500 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PGM3O95394 542 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 MPIG6BO95866 241 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ABHD16AO95870 558 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PRKCBP05771 671 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 C8BP07358 591 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ENO2P09104 434 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 FTH1P19P0C7X4 201 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ATP6V1B1P15313 513 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 HDCP19113 662 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PTGS1P23219 599 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PRDX5P30044 214 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 MLH1P40692 756 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PPP2CBP62714 309 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PPP2CAP67775 309 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 EXOSC9Q06265 439 aaKnown RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 GALNT2Q10471 571 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 FSTL1Q12841 308 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PRKD1Q15139 912 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 MIIPQ5JXC2 388 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ATG16L1Q676U5 607 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 SLFN13Q68D06 897 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 VASNQ6EMK4 673 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 DPY19L2P1Q6NXN4 242 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 CASC1Q6TDU7 716 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 TMC5Q6UXY8 1006 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 RRAGAQ7L523 313 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 PROSER1Q86XN7 944 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 GLB1L2Q8IW92 636 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 DCBLD1Q8N8Z6 715 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 CCDC150Q8NCX0 1101 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 GPR156Q8NFN8 814 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 OR8H1Q8NGG4 311 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 KCNG4Q8TDN1 519 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 CFHR4Q92496 578 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 HIC2Q96JB3 615 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 SNX27Q96L92 541 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 SPAG5Q96R06 1193 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 REEP2Q9BRK0 252 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 NOL10Q9BSC4 688 aaKnown RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 C1orf43Q9BWL3 253 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ITPAQ9BY32 194 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ZNF518BQ9C0D4 1074 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 CHST8Q9H2A9 424 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ABHD16BQ9H3Z7 469 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 CXorf56Q9H5V9 222 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 MANSC1Q9H8J5 431 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 SPON1Q9HCB6 807 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 CCDC177Q9NQR7 707 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 HSPBP1Q9NZL4 362 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 TMOD4Q9NZQ9 345 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 MTRRQ9UBK8 725 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 FTSJ1Q9UET6 329 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 ODF2LQ9ULJ1 636 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 C19orf53Q9UNZ5 99 aaPredicted RBP4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 MED16Q9Y2X0 877 aa4.24□□□□□ -1.73
CLNS1A-208ENST00000527265 RRP7AQ9Y3A4 280 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms