RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ADORA2BP29275 332 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 CLCNKBP51801 687 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 PDE4CQ08493 712 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 ATP13A4Q4VNC1 1196 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 ZDHHC17Q8IUH5 632 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 C10orf67Q8IYJ2 551 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 C1orf54Q8WWF1 131 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 LPIN3Q9BQK8 851 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 TRIM31Q9BZY9 425 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 SAGE1Q9NXZ1 904 aa17.04■□□□□ 0.32
SNRNP35-204ENST00000527158 LRCH4O75427 683 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM153BP0C7A2 387 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 CCDC130P13994 396 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 GPD1P21695 349 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 ZNF143P52747 638 aaPredicted RBP17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 WSCD1Q658N2 575 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 DUPD1Q68J44 220 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 IQCKQ8N0W5 287 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 B3GALNT2Q8NCR0 500 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 SENP8Q96LD8 212 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 SLITRK1Q96PX8 696 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 KLHL11Q9NVR0 708 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 CENPFP49454 3210 aa17.03■□□□□ 0.32
SNRNP35-204ENST00000527158 SRRM3A6NNA2 597 aaPredicted RBP17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 KBTBD13C9JR72 458 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 PI4K2BG5E9Z4 385 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 EBAG9O00559 213 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 CAPN15O75808 1086 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 TJP3O95049 919 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 ECEL1O95672 775 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 GBP1P32455 592 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 SLC8A3P57103 927 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 KLF1Q13351 362 aaPredicted RBP17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 DSTYKQ6XUX3 929 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 TMEM86AQ8N2M4 240 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 SLC43A3Q8NBI5 491 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 SLC2A14Q8TDB8 520 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 CNPY3Q9BT09 278 aa17.02■□□□□ 0.32
SNRNP35-204ENST00000527158 ATXN2Q99700 1313 aaKnown RBP17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 PDGFRAP16234 1089 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 DESP17661 470 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 ECHS1P30084 290 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 KCNJ1P48048 391 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 SLC6A3Q01959 620 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 SLC25A11Q02978 314 aaKnown RBP17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 SNX1Q13596 522 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 LRIG3Q6UXM1 1119 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 OSTM1Q86WC4 334 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 SCUBE3Q8IX30 993 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 GRK7Q8WTQ7 553 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 SLCO2A1Q92959 643 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 HERPUD2Q9BSE4 406 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 DCLK3Q9C098 648 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 ZWILCHQ9H900 591 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 CACNG4Q9UBN1 327 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 PTPN22Q9Y2R2 807 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 PTCH2Q9Y6C5 1203 aa17.02■□□□□ 0.31
SNRNP35-204ENST00000527158 LRRD1A4D1F6 860 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 CASTOR2A6NHX0 329 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 C2CD4BA6NLJ0 364 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 GABRDO14764 452 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 POMCP01189 267 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 PTPN1P18031 435 aaKnown RBP17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 ACADSBP45954 432 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 LHX1P48742 406 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 PPP1R7Q15435 360 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 CCNG2Q16589 344 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 UPP1Q16831 310 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 TFDP3Q5H9I0 405 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 TXNRD3NBQ6F5E7 133 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 OLFML1Q6UWY5 402 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 MFSD7Q6UXD7 560 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 SPOCD1Q6ZMY3 1216 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 ARFGAP1Q8N6T3 406 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 TSEN2Q8NCE0 465 aaKnown RBP17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 RXFP2Q8WXD0 754 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 CHST7Q9NS84 486 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 PHF24Q9UPV7 400 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 TRIM17Q9Y577 477 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 A0A087WUV0 522 aaPredicted RBP17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 ARVCFO00192 962 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 PTPN7P35236 360 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 PCK1P35558 622 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 HTRA3P83110 453 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 GRIK3Q13003 919 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 KAZNQ674X7 775 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 KDM7AQ6ZMT4 941 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 SYDE1Q6ZW31 735 aaPredicted RBP17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 B4GALNT4Q76KP1 1039 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 ECHDC2Q86YB7 292 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 ATL2Q8NHH9 583 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 RAPGEF5Q92565 580 aa17.01■□□□□ 0.31
SNRNP35-204ENST00000527158 LRRC45Q96CN5 670 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms