RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 ARNTLO00327 626 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CLDN5O00501 218 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 ZNF263O14978 683 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CHADO15335 359 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 AP1G2O75843 785 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 RTN3O95197 1032 aaPredicted RBP11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CCDC192P0DO97 292 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 GLULP15104 373 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CD58P19256 250 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 TBXAS1P24557 533 aaPredicted RBP11.42□□□□□ -0.58
SYVN1-208ENST00000527142 GDI1P31150 447 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CACNA2D1P54289 1103 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 MLLT6P55198 1093 aaPredicted RBP11.42□□□□□ -0.58
SYVN1-208ENST00000527142 STARD6P59095 220 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 YWHAEP62258 255 aaKnown RBP11.42□□□□□ -0.58
SYVN1-208ENST00000527142 GRM2Q14416 872 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 ARHGAP29Q52LW3 1261 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 SLC44A4Q53GD3 710 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 C1orf228Q6PIY5 440 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 PAQR9Q6ZVX9 377 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 YAF2Q8IY57 180 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CELF5Q8N6W0 485 aaKnown RBP11.42□□□□□ -0.58
SYVN1-208ENST00000527142 TMEM105Q8N8V8 129 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 STKLD1Q8NE28 680 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 PDZD8Q8NEN9 1154 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 SLC2A14Q8TDB8 520 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 OVCA2Q8WZ82 227 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 RSPRY1Q96DX4 576 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 MSANTD3Q96H12 275 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 SLITRK1Q96PX8 696 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 HNRNPABQ99729 332 aaKnown RBP11.42□□□□□ -0.58
SYVN1-208ENST00000527142 SLC46A2Q9BY10 475 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 OSBPL6Q9BZF3 934 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 CSNK1G1Q9HCP0 422 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.42□□□□□ -0.585e-9■■■■■ 51.3
SYVN1-208ENST00000527142 CISHQ9NSE2 258 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 COMMD8Q9NX08 183 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 TRPM5Q9NZQ8 1165 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 DACH1Q9UI36 760 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 PTPRDP23468 1912 aa11.42□□□□□ -0.58
SYVN1-208ENST00000527142 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 NUP210Q8TEM1 1887 aaPredicted RBP11.41□□□□□ -0.58
SYVN1-208ENST00000527142 CKMP06732 381 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 USP17L7P0C7H9 530 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 FAM200BP0CF97 657 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 CCDC130P13994 396 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 STX17P56962 302 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 USP46P62068 366 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 ORC1Q13415 861 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 CUL2Q13617 745 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 TXNDC8Q6A555 127 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 NUP93Q8N1F7 819 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 KIAA1958Q8N8K9 716 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 MAB21L3Q8N8X9 362 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 PJA1Q8NG27 643 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 BPIFB1Q8TDL5 484 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 WHAMMQ8TF30 809 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 USP13Q92995 863 aaPredicted RBP11.41□□□□□ -0.58
SYVN1-208ENST00000527142 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 ARID3AQ99856 593 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
SYVN1-208ENST00000527142 PNPLA8Q9NP80 782 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 FAM49BQ9NUQ9 324 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 TDP1Q9NUW8 608 aa11.41□□□□□ -0.58
SYVN1-208ENST00000527142 THG1LQ9NWX6 298 aaKnown RBP11.41□□□□□ -0.58
SYVN1-208ENST00000527142 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
SYVN1-208ENST00000527142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.41□□□□□ -0.58
SYVN1-208ENST00000527142 ZFHX2Q9C0A1 2572 aaPredicted RBP11.4□□□□□ -0.58
SYVN1-208ENST00000527142 KANSL1LA0AUZ9 987 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 FAM92AA1XBS5 289 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 ZNF840PA6NDX5 716 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 MAN2B1O00754 1011 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 TNFRSF10BO14763 440 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
SYVN1-208ENST00000527142 LRRN2O75325 713 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 MBD3O95983 291 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 AFPP02771 609 aaKnown RBP11.4□□□□□ -0.58
SYVN1-208ENST00000527142 TCF3P15923 654 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 YWHAQP27348 245 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 ERCC5P28715 1186 aaPredicted RBP11.4□□□□□ -0.58
SYVN1-208ENST00000527142 MAGEA9P43362 315 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 TUBP50607 506 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 SLC5A3P53794 718 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 PTPN5P54829 565 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 USP4Q13107 963 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 CT47A1Q5JQC4 288 aaPredicted RBP11.4□□□□□ -0.58
SYVN1-208ENST00000527142 ZNF852Q6ZMS4 543 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 TPRG1Q6ZUI0 275 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 CCDC105Q8IYK2 499 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 C12orf29Q8N999 325 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 NT5C1BQ96P26 610 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 LRRC3BQ96PB8 259 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 NELL2Q99435 816 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 SMOQ99835 787 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 IRF2BPLQ9H1B7 796 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 TRPC7Q9HCX4 862 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 IL37Q9NZH6 218 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 GCNT4Q9P109 453 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 ARHGAP26Q9UNA1 814 aa11.4□□□□□ -0.58
SYVN1-208ENST00000527142 CCL26Q9Y258 94 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms