RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 GTPBP2Q9BX10 602 aaKnown RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 MTMR12Q9C0I1 747 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 TMEM9BQ9NQ34 198 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 CRTAC1Q9NQ79 661 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 FOXD4L1Q9NU39 408 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 TMEM74BQ9NUR3 256 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 RBAKQ9NYW8 714 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 BCCIPQ9P287 314 aaKnown RBP eCLIP7.04□□□□□ -1.28
CD44-221ENST00000526000 CFAP97Q9P2B7 532 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 UXTQ9UBK9 157 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 SIX4Q9UIU6 781 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 EXOC7Q9UPT5 735 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.04□□□□□ -1.28
CD44-221ENST00000526000 CPQQ9Y646 472 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 SCN1AP35498 2009 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 DNAH14Q0VDD8 3507 aa7.04□□□□□ -1.28
CD44-221ENST00000526000 F8VP50 259 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 TRIM24O15164 1050 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 AKAP3O75969 853 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 CLSTN1O94985 981 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 NFATC1O95644 943 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 CYP17A1P05093 508 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 CFIP05156 583 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 MBL2P11226 248 aaPredicted RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 PCSK1P29120 753 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 LONP1P36776 959 aaKnown RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 GNL1P36915 607 aaPredicted RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 PNPLA4P41247 253 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 LHX1P48742 406 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 SHC2P98077 582 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 TAF10Q12962 218 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 ZNF268Q14587 947 aaPredicted RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 DHCR24Q15392 516 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 CRY1Q16526 586 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 GAB4Q2WGN9 574 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 TRIM61Q5EBN2 209 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 MDH1BQ5I0G3 518 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 L1TD1Q5T7N2 865 aaKnown RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 PMS2CLQ68D20 193 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 RHBDF2Q6PJF5 856 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 CBWD2Q8IUF1 395 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 ADGRG2Q8IZP9 1017 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 KCTD17Q8N5Z5 321 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 PDILTQ8N807 584 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 MDGA1Q8NFP4 955 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 OR6B3Q8NGW1 331 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 WBP2Q969T9 261 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 DNAJC19Q96DA6 116 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 ANKRD36BP1Q96IX9 119 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 MYRFLQ96LU7 910 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 PNKPQ96T60 521 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 PKMYT1Q99640 499 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 MRPL45Q9BRJ2 306 aaKnown RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 CCSER1Q9C0I3 900 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 SNX25Q9H3E2 840 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 TMEM206Q9H813 350 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 PANK4Q9NVE7 773 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 EBF1Q9UH73 591 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 MBD1Q9UIS9 605 aaPredicted RBP7.03□□□□□ -1.28
CD44-221ENST00000526000 ZMYM5Q9UJ78 669 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 NME7Q9Y5B8 376 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 PCDHB13Q9Y5F0 798 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 COL4A2P08572 1712 aa7.03□□□□□ -1.28
CD44-221ENST00000526000 PTPRJQ12913 1337 aa7.02□□□□□ -1.28
CD44-221ENST00000526000 KIF26AQ9ULI4 1882 aaPredicted RBP7.02□□□□□ -1.28
CD44-221ENST00000526000 TCRBV21S2A2A0A5A6 115 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 TBC1D3BA6NDS4 549 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 ZNF840PA6NDX5 716 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 GABRDO14764 452 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 CLIC2O15247 247 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 PPP1R37O75864 691 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 KAT7O95251 611 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 LDHAP00338 332 aaKnown RBP7.02□□□□□ -1.29
CD44-221ENST00000526000 TNNC2P02585 160 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 APODP05090 189 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 HSP90AA1P07900 732 aaKnown RBP7.02□□□□□ -1.29
CD44-221ENST00000526000 DLATP10515 647 aaKnown RBP7.02□□□□□ -1.29
CD44-221ENST00000526000 IRF1P10914 325 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 ITPKAP23677 461 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 ANXA13P27216 316 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 CACNA2D1P54289 1103 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 FAM193AP78312 1265 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 SIM1P81133 766 aaPredicted RBP7.02□□□□□ -1.29
CD44-221ENST00000526000 MYO1EQ12965 1108 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 USP4Q13107 963 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 RESTQ13127 1097 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 LY6G5CQ5SRR4 150 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 TDRD10Q5VZ19 366 aaKnown RBP7.02□□□□□ -1.29
CD44-221ENST00000526000 FAM171BQ6P995 826 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 C19orf48Q6RUI8 117 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 C4orf50Q6ZRC1 276 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 DENND5BQ6ZUT9 1274 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 LPCAT2Q7L5N7 544 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 TMEM86AQ8N2M4 240 aa7.02□□□□□ -1.29
CD44-221ENST00000526000 GPD1LQ8N335 351 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms