RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 PAQR9Q6ZVX9 377 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SLC9A9Q8IVB4 645 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 ATRIPQ8WXE1 791 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SPATA17Q96L03 361 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SEMA4AQ9H3S1 761 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 THG1LQ9NWX6 298 aaKnown RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
SSBP3-210ENST00000525990 SPTBN4Q9H254 2564 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 DCHS1Q96JQ0 3298 aa12.85□□□□□ -0.35
SSBP3-210ENST00000525990 GPR179Q6PRD1 2367 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 TRAV19A0A0A6YYK7 116 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 CHURC1-FNTBB4DL54 471 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 K7ESF4 209 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 AKAP3O75969 853 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 RHOBTB3O94955 611 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF202O95125 648 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 EGFP01133 1207 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 USP17L7P0C7H9 530 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 ATICP31939 592 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 FNTBP49356 437 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 FAM160A1Q05DH4 1040 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 MAPRE1Q15691 268 aaKnown RBP12.84□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 HEATR6Q6AI08 1181 aaKnown RBP12.84□□□□□ -0.35
SSBP3-210ENST00000525990 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 ACOT1Q86TX2 421 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 GOLGA5Q8TBA6 731 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
SSBP3-210ENST00000525990 ERCC4Q92889 916 aaPredicted RBP12.84□□□□□ -0.35
SSBP3-210ENST00000525990 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 TTLL2Q9BWV7 592 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 RNF38Q9H0F5 515 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 LINC00597Q9H2U6 94 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 KIF9Q9HAQ2 790 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 ZNF292O60281 2723 aa12.84□□□□□ -0.35
SSBP3-210ENST00000525990 A0A1W2PQ27 194 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 A0A1W2PQ64 194 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 A0A1W2PQD8 194 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 BEST1O76090 585 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 ABL1P00519 1130 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 CCDC130P13994 396 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 NR2F2P24468 414 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 ANXA13P27216 316 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 GJA4P35212 333 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 CXCL12P48061 93 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 PXNP49023 591 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-210ENST00000525990 CCR3P51677 355 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 TAF10Q12962 218 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 PNOCQ13519 176 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 LRRC32Q14392 662 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 ZNF268Q14587 947 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-210ENST00000525990 KCNB1Q14721 858 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 EML3Q32P44 896 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 ZACNQ401N2 412 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 TMEM196Q5HYL7 178 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 SV2AQ7L0J3 742 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 FAM35AQ86V20 835 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 SPEM1Q8N4L4 309 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 RUBCNQ92622 972 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 MSANTD3Q96H12 275 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 C8orf48Q96LL4 319 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 TWNKQ96RR1 684 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 SCAND2PQ9GZW5 306 aaPredicted RBP12.83□□□□□ -0.36
SSBP3-210ENST00000525990 EPC1Q9H2F5 836 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 MMRN2Q9H8L6 949 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 DUS2Q9NX74 493 aaKnown RBP12.83□□□□□ -0.36
SSBP3-210ENST00000525990 SMPD4Q9NXE4 827 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 FRYLO94915 3013 aa12.83□□□□□ -0.36
SSBP3-210ENST00000525990 SPAG17Q6Q759 2223 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 DMXL1Q9Y485 3027 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 ZNF840PA6NDX5 716 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 TRIM66O15016 1216 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 HLA-DRAP01903 254 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 MYL1P05976 194 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 HDCP19113 662 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 PIK3CAP42336 1068 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 ASPAP45381 313 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 GCLMP48507 274 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 PGFP49763 221 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 NDST1P52848 882 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 NOP14P78316 857 aaKnown RBP12.82□□□□□ -0.36
SSBP3-210ENST00000525990 ZCWPW2Q504Y3 356 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 DGKKQ5KSL6 1271 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 CC2D1AQ6P1N0 951 aaPredicted RBP12.82□□□□□ -0.36
SSBP3-210ENST00000525990 MAMSTRQ6ZN01 415 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 C12orf29Q8N999 325 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 SCAMP5Q8TAC9 235 aa12.82□□□□□ -0.36
SSBP3-210ENST00000525990 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms