RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 FNBP1LQ5T0N5 605 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 METTL7BQ6UX53 244 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 CHSY1Q86X52 802 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 ANKMY2Q8IV38 441 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 FBXO36Q8NEA4 188 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 DCAKDQ8WVC6 231 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 APBB2Q92870 758 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 UTP4Q969X6 686 aaKnown RBP8.7□□□□□ -1.02
CHD7-202ENST00000524602 KLRG1Q96E93 195 aa8.7□□□□□ -1.02
CHD7-202ENST00000524602 IGKV6-21A0A0C4DH24 114 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 FAM155BO75949 473 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 RNF8O76064 485 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 LMNAP02545 664 aaKnown RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 PSMC1P62191 440 aaKnown RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 FAM47CQ5HY64 1035 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 DENND1BQ6P3S1 775 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 DLK2Q6UY11 383 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 XYLT1Q86Y38 959 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 KCTD6Q8NC69 237 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 MIEF2Q96C03 454 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 MIS12Q9H081 205 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 ZWILCHQ9H900 591 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 RNPEPL1Q9HAU8 725 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 PTPRHQ9HD43 1115 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 ZFP69BQ9UJL9 534 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 A8MUI8 341 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 IL1R2P27930 398 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 PTPN4P29074 926 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 GDF10P55107 478 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 TFAMQ00059 246 aaKnown RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 CMPK2Q5EBM0 449 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 NLRP9Q7RTR0 991 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 ARFGAP1Q8N6T3 406 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 ENDOVQ8N8Q3 282 aaKnown RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 SPOCK2Q92563 424 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 MCRS1Q96EZ8 462 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 PNPLA8Q9NP80 782 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 ASNSD1Q9NWL6 643 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 SLC5A4Q9NY91 659 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 XPO7Q9UIA9 1087 aaKnown RBP8.69□□□□□ -1.02
CHD7-202ENST00000524602 PPP2R3BQ9Y5P8 575 aa8.69□□□□□ -1.02
CHD7-202ENST00000524602 EIF4E1BA6NMX2 242 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 GOLGA8SH3BPF8 625 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 GOLGA8MH3BSY2 632 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ACKR2O00590 384 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CHADO15335 359 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 DIAPH2O60879 1101 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 T-ENOLP0DO92 83 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CALB2P22676 271 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SSTR1P30872 391 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TCF7P36402 384 aaPredicted RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 EIF3EP60228 445 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 DPYSL3Q14195 570 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ZNF667Q5HYK9 610 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ANKRD22Q5VYY1 191 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CAPN12Q6ZSI9 719 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 RFX6Q8HWS3 928 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ZNF276Q8N554 614 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SLC4A11Q8NBS3 891 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHD7-202ENST00000524602 ACSF2Q96CM8 615 aaPredicted RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 SLC7A6OSQ96CW6 309 aaPredicted RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 MPHOSPH6Q99547 160 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 TRIM55Q9BYV6 548 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 SYNCQ9H7C4 482 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 MANSC1Q9H8J5 431 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CYP3A43Q9HB55 503 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 HAO1Q9UJM8 370 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 IKBKGQ9Y6K9 419 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 DNAJC6O75061 913 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 LGR5O75473 907 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ENDOD1O94919 500 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TRUB2O95900 331 aaKnown RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 DHRS4L1P0CG22 281 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 ATICP31939 592 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 DYNLT1P63172 113 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TFDP2Q14188 446 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 PLPPR4Q7Z2D5 763 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 RIOX2Q8IUF8 465 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TTC39CQ8N584 583 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 JOSD2Q8TAC2 188 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TCP10LQ8TDR4 215 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 APOPT1Q96IL0 206 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 TBC1D10AQ9BXI6 508 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 VRTNQ9H8Y1 702 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 PTPRFP10586 1907 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 KLF11O14901 512 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 DDNO94850 711 aaPredicted RBP8.68□□□□□ -1.02
CHD7-202ENST00000524602 MT-ND3P03897 115 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 HMGCRP04035 888 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 P4HA1P13674 534 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 CD19P15391 556 aa8.68□□□□□ -1.02
CHD7-202ENST00000524602 GNAZP19086 355 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms